Advanced Light Microscopy FacilityLinks
Information resources
Microscopy primer - all about microscopy, fluorescence etc.
Confocal Listserver - browse discussions on (confocal) microscopy subjects
EAMNET - Teaching modules on microscopy techniques, teaching courses and downloads of microscopy related software packages
ELMI - The European Light Microscopy Initiative is a communication network between European scientists working in the field of light microscopy and the manufacturers of their equipment.
Spectra of fluorescent dyes
Fluorescent dyes spectra @ MCB Arizona (Carl Boswell)
Fluorescence dye and filter viewer (Carl Zeiss)
Spectra of fluorophores, lightsources, filters and detectors (Semrock)
Fluorescence spectra viewer (Invitrogen)
Fluorescence spectra viewer (BD Biosciences)
2-Photon cross-sections (Cornell University)
Software
ImageJ - Freeware image processing software based on Java (Windows, Mac, Linux)
Fiji - Image processing package based on ImageJ
Cellprofiler - Open source image analysis for large datasets
Cellcognition - Open source image analysis for large datasets
EAMNET Downloads - Software packages, macros and plugins for image processing
VisBio - visualization and analysis of multidimensional image data
BioImageXD - free open source software for analysis, processing and 3D rendering of multi dimensional microscopy images
EasyFRAP (Rapsomaniki et al 2012, University of Patras, Greece)
FrapCalc (IgorPro procedure to analyze FRAP data by K. Miura, EMBL)
FRAPAnalyser (A. Halavatyi, M. Yatskou, E. Friederich, University of Luxembourg)
BioImaging Initiatives
Euro-BioImaging - Research Infrastructure for Imaging Technologies in Biological and Biomedical Sciences, on the ESFRI roadmap
German BioImaging - Biological Imaging Facilities in Germany
Swiss BioImaging - Biological Imaging Facilities in Switzerland
Bioimaging UK - an organic organization of UK scientists that develop, use, or administer imaging solutions for life sciences research
Swedish Bioimaging network - The Swedish BioImaging Network aims to facilitate collaboration between researchers in Sweden working in bioimaging and related fields.
France Bioimaging - Biological Imaging Facilities in France
Italy BioImaging - Biological Imaging Facilities in Italy
Spanish BioImaging (REMOA) - Biological Imaging Facilities in Spain
Portuguese BioImaging - Biological Imaging Facilities in Portugal