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Ries GroupPublications

Superresolution Imaging of Amyloid Fibrils with Binding-Activated Probes.
Ries, J., Udayar, V., Soragni, A., Hornemann, S., Nilsson, K.P., Riek, R., Hock, C., Ewers, H., Aguzzi, A.A. & Rajendran, L.
ACS Chem Neurosci. 2013 Apr 22. PubMed

Tuning the "roadblock" effect in Kinesin-based transport.
Schmidt, C., Kim, B., Grabner, H., Ries, J., Kulomaa, M. & Vogel, V.
Nano Lett. 2012 Jul 11;12(7):3466-71. Epub 2012 Jun 14. PubMed

A simple, versatile method for GFP-based super-resolution microscopy via nanobodies.
Ries, J., Kaplan, C., Platonova, E., Eghlidi, H. & Ewers, H.
Nat Methods. 2012 Jun;9(6):582-4. doi: 10.1038/nmeth.1991. Epub 2012 Apr 29. PubMed

Fluorescence Correlation Spectroscopy (FCS).
Ries, J., Weidemann, T. & Schwille, P.
Comprehensive Biophysics 2, Biophysical Techniques for Characterization of Cells, 210–245 (2012).

Fluorescence correlation spectroscopy.
Ries, J. J. & Schwille, P. P.
Bioessays 34, 361–368 (2012).

Binding-activated localization microscopy of DNA structures.
Schoen, I., Ries, J., Klotzsch, E., Ewers, H. & Vogel, V.
Nano Lett. 2011 Sep 14;11(9):4008-11. Epub 2011 Aug 18. PubMed

Cxcl12 evolution--subfunctionalization of a ligand through altered interaction with the chemokine receptor.
Boldajipour, B., Doitsidou, M., Tarbashevich, K., Laguri, C., Yu, S.R., Ries, J., Dumstrei, K., Thelen, S., Dorries, J., Messerschmidt, E.M., Thelen, M., Schwille, P., Brand, M., Lortat-Jacob, H. & Raz
Development. 2011 Jul;138(14):2909-14. PubMed

DNA damage regulates the mobility of Brca2 within the nucleoplasm of living cells.
Jeyasekharan, A.D., Ayoub, N., Mahen, R., Ries, J., Esposito, A., Rajendra, E., Hattori, H., Kulkarni, R.P. & Venkitaraman, A.R.
Proc Natl Acad Sci U S A. 2010 Dec 14;107(50):21937-42. Epub 2010 Nov 22. PubMed

Automated suppression of sample-related artifacts in Fluorescence Correlation Spectroscopy.
Ries, J., Bayer, M., Csucs, G., Dirkx, R., Solimena, M., Ewers, H. & Schwille, P.
Opt Express. 2010 May 24;18(11):11073-82. doi: 10.1364/OE.18.011073. PubMed

NATO Science for Peace and Security Series B: Physics and Biophysics.
Schwille, P. & Ries, J.
63–85 (Biophotonics: Dordrecht, 2010).doi:10.1007/978-90-481-9977-8_4

Scanning FCS for the characterization of protein dynamics in live cells.
Petrasek, Z., Ries, J. & Schwille, P.
Methods Enzymol. 2010;472:317-43. PubMed

A Comprehensive Framework for Fluorescence Cross-Correlation Spectroscopy.
J. Ries, Z. Petrasek, A. Garcia-Saez, and P. Schwille.
New Journal of Physics 12, 113009 (2010).

Membrane promotes tBID interaction with BCL(XL).
Garcia-Saez, A.J., Ries, J., Orzaez, M., Perez-Paya, E. & Schwille, P.
Nat Struct Mol Biol. 2009 Nov;16(11):1178-85. Epub 2009 Oct 11. PubMed

Detergent-activated BAX protein is a monomer.
Ivashyna, O., Garcia-Saez, A.J., Ries, J., Christenson, E.T., Schwille, P. & Schlesinger, P.H.
J Biol Chem. 2009 Sep 4;284(36):23935-46. Epub 2009 Jun 29. PubMed

Fgf8 morphogen gradient forms by a source-sink mechanism with freely diffusing molecules.
Yu, S.R., Burkhardt, M., Nowak, M., Ries, J., Petrasek, Z., Scholpp, S., Schwille, P. & Brand, M.
Nature. 2009 Sep 24;461(7263):533-6. Epub 2009 Sep 9. PubMed

Modular scanning FCS quantifies receptor-ligand interactions in living multicellular organisms.
Ries, J., Yu, S.R., Burkhardt, M., Brand, M. & Schwille, P.
Nat Methods. 2009 Sep;6(9):643-5. Epub 2009 Aug 2. PubMed

Accurate determination of membrane dynamics with line-scan FCS.
Ries, J., Chiantia, S. & Schwille, P.
Biophys J. 2009 Mar 4;96(5):1999-2008. PubMed

Fluorescence correlation spectroscopy in membrane structure elucidation.
Chiantia, S., Ries, J. & Schwille, P.
Biochim Biophys Acta. 2009 Jan;1788(1):225-33. Epub 2008 Aug 29. PubMed

Plasma membranes are poised for activation of raft phase coalescence at physiological temperature.
Lingwood, D., Ries, J., Schwille, P. & Simons, K.
Proc Natl Acad Sci U S A. 2008 Jul 22;105(29):10005-10. Epub 2008 Jul 9. PubMed

Total internal reflection fluorescence correlation spectroscopy: effects of lateral diffusion and surface-generated fluorescence.
Ries, J., Petrov, E.P. & Schwille, P.
Biophys J. 2008 Jul;95(1):390-9. Epub 2008 Mar 13. PubMed

New concepts for fluorescence correlation spectroscopy on membranes.
Ries, J. & Schwille, P.
Phys Chem Chem Phys. 2008 Jun 28;10(24):3487-97. Epub 2008 Mar 27. PubMed

Spatial regulators for bacterial cell division self-organize into surface waves in vitro.
Loose, M., Fischer-Friedrich, E., Ries, J., Kruse, K. & Schwille, P.
Science. 2008 May 9;320(5877):789-92. PubMed

Role of ceramide in membrane protein organization investigated by combined AFM and FCS.
Chiantia, S., Ries, J., Chwastek, G., Carrer, D., Li, Z., Bittman, R. & Schwille, P.
Biochim Biophys Acta. 2008 May;1778(5):1356-64. Epub 2008 Feb 29. PubMed

Supercritical angle fluorescence correlation spectroscopy.
Ries, J., Ruckstuhl, T., Verdes, D. & Schwille, P.
Biophys J. 2008 Jan 1;94(1):221-9. Epub 2007 Sep 7. PubMed

Rho regulates membrane transport in the endocytic pathway to control plasma membrane specialization in oligodendroglial cells.
Kippert, A., Trajkovic, K., Rajendran, L., Ries, J. & Simons, M.
J Neurosci. 2007 Mar 28;27(13):3560-70. PubMed

Combined AFM and two-focus SFCS study of raft-exhibiting model membranes.
Chiantia, S., Ries, J., Kahya, N. & Schwille, P.
Chemphyschem. 2006 Nov 13;7(11):2409-18. PubMed

Mobility of Min-proteins in Escherichia coli measured by fluorescence correlation spectroscopy.
Meacci, G., Ries, J., Fischer-Friedrich, E., Kahya, N., Schwille, P. & Kruse, K.
Phys Biol. 2006 Nov 28;3(4):255-63. PubMed

Studying slow membrane dynamics with continuous wave scanning fluorescence correlation spectroscopy.
Ries, J. & Schwille, P.
Biophys J. 2006 Sep 1;91(5):1915-24. Epub 2006 Jun 16. PubMed

Effects of ceramide on liquid-ordered domains investigated by simultaneous AFM and FCS.
Chiantia, S., Kahya, N., Ries, J. & Schwille, P.
Biophys J. 2006 Jun 15;90(12 PubMed

Experimental vacuum squeezing in rubidium vapor via self-rotation.
Ries, J., Brezger, B. & Lvovsky, A.
Phys Rev a 68, – (2003)

Quantum scissors: Teleportation of single-mode optical states by means of a nonlocal single photon
Ries, J. & Lvovsky, A.
EPL (Europhysics Letters) (2003).