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Total: 11 publication(s)


Achim K, Pettit JB, Saraiva LR, Gavriouchkina D, Larsson T, Arendt D, Marioni JC. (2015)

High-throughput spatial mapping of single-cell RNA-seq data to tissue of origin.

Nat. Biotechnol.
Europe PMC


Scialdone A, Achim K, Marioni JC. (2014)

Single Cell Genomics meeting in Stockholm: from single cells to cell types.

Genome Biol. 15(10):496. doi:10.1186/s13059-014-0496-x
Europe PMC | doi

Pettit JB, Tomer R, Achim K, Richardson S, Azizi L, Marioni J. (2014)

Identifying Cell Types from Spatially Referenced Single-Cell Expression Datasets

PLoS Comput. Biol. 10(9):e1003824. doi:10.1371/journal.pcbi.1003824
Europe PMC | doi

Achim K, Arendt D. (2014)

Structural evolution of cell types by step-wise assembly of cellular modules

Curr. Opin. Genet. Dev. 27C:102-108. doi:10.1016/j.gde.2014.05.001
Europe PMC | doi

Achim K, Salminen M, Partanen J. (2014)

Mechanisms regulating GABAergic neuron development

Cell. Mol. Life Sci. 71(8):1395-1415. doi:10.1007/s00018-013-1501-3
Europe PMC | doi


Lahti L, Achim K, Partanen J. (2013)

Molecular regulation of GABAergic neuron differentiation and diversity in the developing midbrain

Acta Physiol (Oxf) 207(4):616-627. doi:10.1111/apha.12062
Europe PMC | doi


Achim K, Peltopuro P, Lahti L, Tsai HH, Zachariah A, Astrand M, Salminen M, Rowitch D, Partanen J. (2012)

The role of Tal2 and Tal1 in the differentiation of midbrain GABAergic neuron precursors.

Biol Open 2(10):990-997. doi:10.1242/bio.20135041
Europe PMC | doi

Virolainen SM, Achim K, Peltopuro P, Salminen M, Partanen J. (2012)

Transcriptional regulatory mechanisms underlying the GABAergic neuron fate in different diencephalic prosomeres.

Development 139(20):3795-3805. doi:10.1242/dev.075192
Europe PMC | doi

Achim K, Peltopuro P, Lahti L, Li J, Salminen M, Partanen J. (2012)

Distinct developmental origins and regulatory mechanisms for GABAergic neurons associated with dopaminergic nuclei in the ventral mesodiencephalic region.

Development 139(13):2360-2370. doi:10.1242/dev.076380
Europe PMC | doi


Peltopuro P, Kala K, Partanen J. (2010)

Distinct requirements for Ascl1 in subpopulations of midbrain GABAergic neurons.

Dev. Biol. 343(1-2):63-70. doi:10.1016/j.ydbio.2010.04.015
Europe PMC | doi


Kala K, Haugas M, Lilleväli K, Guimera J, Wurst W, Salminen M, Partanen J. (2009)

Gata2 is a tissue-specific post-mitotic selector gene for midbrain GABAergic neurons.

Development 136(2):253-262. doi:10.1242/dev.029900
Europe PMC | doi