Staff at EMBL

Bernd Fischer

Research Associate
Huber Group

EMBL Heidelberg, Meyerhofstraße 1, 69117 Heidelberg, Germany

Publications

Properties of isotope patterns and their utility for peptide identification in large-scale proteomic experiments. Okawa, S., Fischer, B. & Krijgsveld, J. Rapid Commun Mass Spectrom. 2013 May 15;27(9):1067-75. doi: 10.1002/rcm.6551. PubMed

Mapping genetic interactions in human cancer cells with RNAi and multiparametric phenotyping. Laufer, C., Fischer, B., Billmann, M., Huber, W. & Boutros, M. Nat Methods. 2013 May;10(5):427-31. doi: 10.1038/nmeth.2436. Epub 2013 Apr 7. PubMed

System-wide identification of RNA-binding proteins by interactome capture. Castello, A., Horos, R., Strein, C., Fischer, B., Eichelbaum, K., Steinmetz, L.M., Krijgsveld, J. & Hentze, M.W. Nat Protoc. 2013 Feb 14;8(3):491-500. doi: 10.1038/nprot.2013.020. Epub 2013 Feb14. PubMed

Insights into RNA Biology from an Atlas of Mammalian mRNA-Binding Proteins. Castello, A., Fischer, B., Eichelbaum, K., Horos, R., Beckmann, B.M., Strein, C., Davey, N.E., Humphreys, D.T., Preiss, T., Steinmetz, L.M., Krijgsveld, J. & Hentze, M.W. Cell. 2012 Jun 8;149(6):1393-406. Epub 2012 May 31. PubMed

Mapping of signaling networks through synthetic genetic interaction analysis by RNAi. Horn, T., Sandmann, T., Fischer, B., Axelsson, E., Huber, W. & Boutros, M. Nat Methods. 2011 Apr;8(4):341-6. Epub 2011 Mar 6. PubMed

Extracting quantitative genetic interaction phenotypes from matrix combinatorial RNAi. Axelsson, E., Sandmann, T., Horn, T., Boutros, M., Huber, W. & Fischer, B. BMC Bioinformatics. 2011 Aug 17;12:342. PubMed

CellCognition: time-resolved phenotype annotation in high-throughput live cell imaging. Held, M., Schmitz, M.H., Fischer, B., Walter, T., Neumann, B., Olma, M.H., Peter, M., Ellenberg, J. & Gerlich, D.W. Nat Methods. 2010 Sep;7(9):747-54. doi: 10.1038/nmeth.1486. Epub 2010 Aug 8. PubMed