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Staff at EMBL

Kristoffer Forslund

Research Scientist
Bork Group

EMBL Heidelberg, Meyerhofstraße 1, 69117 Heidelberg, Germany

E-mail: send a mail

Publications

Total: 6 publication(s)

2014

Trachana K, Forslund K, Larsson T, Powell S, Doerks T, von Mering C, Bork P. (2014)
A phylogeny-based benchmarking test for orthology inference reveals the limitations of function-based validation.
PLoS ONE 9(11) doi:10.1371/journal.pone.0111122
Europe PMC | doi

Szklarczyk D, Franceschini A, Wyder S, Forslund K, Heller D, Huerte-Cepas J, Simonovic M, Roth A, Santos A, Tsafou KP, Kuhn M, Bork P, Jensen LJ, von Mering C. (2014)
STRING v10: protein-protein interaction networks, integrated over the tree of life.
Nucleic Acids Res. doi:10.1093/nar/gku1003
Europe PMC | doi

Powell S, Forslund K, Szklarczyk D, Trachana K, Roth A, Huerta-Cepas J, Gabaldón T, Rattei T, Creevey C, Kuhn M, Jensen LJ, von Mering C, Bork P. (2014)
eggNOG v4.0: nested orthology inference across 3686 organisms
Nucleic Acids Res. 42(Database issue):D231-9. doi:10.1093/nar/gkt1253
Europe PMC | doi

Forslund K, Sunagawa S, Coelho LP, Bork P. (2014)
Metagenomic insights into the human gut resistome and the forces that shape it
Bioessays 36(3):316-329. doi:10.1002/bies.201300143
Europe PMC | doi


2013

Forslund K, Sunagawa S, Kultima JR, Mende DR, Arumugam M, Typas A, Bork P. (2013)
Country-specific antibiotic use practices impact the human gut resistome
Genome Res. 23(7):1163-1169. doi:10.1101/gr.155465.113
Europe PMC | doi

Fuller JC, Khoueiry P, Dinkel H, Forslund K, Stamatakis A, Barry J, Budd A, Soldatos TG, Linssen K, Rajput AM, HUB Participants. (2013)
Biggest challenges in bioinformatics
EMBO Rep. 14(4):302-304. doi:10.1038/embor.2013.34
Europe PMC | doi