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Staff at EMBL

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Publications

Total: 18 publication(s)

2014

Maeda K, Poletto M, Chiapparino A, Gavin AC. (2014)
A generic protocol for the purification and characterization of water-soluble complexes of affinity-tagged proteins and lipids
Nat Protoc 9(9):2256-2266. doi:10.1038/nprot.2014.148
Europe PMC | doi

Saliba AE, Vonkova I, Ceschia S, Findlay GM, Maeda K, Tischer C, Deghou S, van Noort V, Bork P, Pawson T, Ellenberg J, Gavin AC. (2014)
A quantitative liposome microarray to systematically characterize protein-lipid interactions
Nat. Methods 11(1):47-50. doi:10.1038/nmeth.2734
Europe PMC | doi


2013

Maeda K, Anand K, Chiapparino A, Kumar A, Poletto M, Kaksonen M, Gavin AC. (2013)
Interactome map uncovers phosphatidylserine transport by oxysterol-binding proteins
Nature 501(7466):257-261. doi:10.1038/nature12430
Europe PMC | doi

Haberkant P, Raijmakers R, Wildwater M, Sachsenheimer T, Brügger B, Maeda K, Houweling M, Gavin AC, Schultz C, van Meer G, Heck AJ, Holthuis JC. (2013)
In vivo profiling and visualization of cellular protein-lipid interactions using bifunctional fatty acids
Angew. Chem. Int. Ed. Engl. 52(14):4033-4038. doi:10.1002/anie.201210178
Europe PMC | doi

Hägglund P, Björnberg O, Navrot N, Mørch Jensen J, Maeda K, Kirkensgaard K, Shahpiri A, Sultan A, Bunkenborg J, Gubler F, Barrero JM, Henriksen A, Finnie C, Svensson B. (2013)
The barley grain thioredoxin system - an update
Front Plant Sci 4:151. doi:10.3389/fpls.2013.00151
Europe PMC | doi


2012

Björnberg O, Maeda K, Svensson B, Hägglund P. (2012)
Dissecting molecular interactions involved in recognition of target disulfides by the barley thioredoxin system
Biochemistry 51(49):9930-9939. doi:10.1021/bi301051b
Europe PMC | doi

Anand K, Maeda K, Gavin AC. (2012)
Structural analyses of the Slm1-PH domain demonstrate ligand binding in the non-canonical site
PLoS ONE 7(5):e36526. doi:10.1371/journal.pone.0036526
Europe PMC | doi


2011

Gavin AC, Maeda K, Kühner S. (2011)
Recent advances in charting protein-protein interaction: mass spectrometry-based approaches
Curr. Opin. Biotechnol. 22(1):42-49. doi:10.1016/j.copbio.2010.09.007
Europe PMC | doi


2010

Gallego O, Betts MJ, Gvozdenovic-Jeremic J, Maeda K, Matetzki C, Aguilar-Gurrieri C, Beltran-Alvarez P, Bonn S, Fernández-Tornero C, Jensen LJ, Kuhn M, Trott J, Rybin V, Müller CW, Bork P, Kaksonen M, Russell RB, Gavin AC. (2010)
A systematic screen for protein-lipid interactions in Saccharomyces cerevisiae
Mol. Syst. Biol. 6:430. doi:10.1038/msb.2010.87
Europe PMC | doi

Maeda K, Hägglund P, Björnberg O, Winther JR, Svensson B. (2010)
Kinetic and thermodynamic properties of two barley thioredoxin h isozymes, HvTrxh1 and HvTrxh2
FEBS Lett. 584(15):3376-3380. doi:10.1016/j.febslet.2010.06.028
Europe PMC | doi


2009

Hägglund P, Kirkensgaard KG, Maeda K, Finnie C, Henriksen A, Svensson B. (2009)
Molecular recognition in NADPH-dependent plant thioredoxin systems - catalytic mechanisms, structural snapshots and target identifications
Academic Press Ltd-Elsevier Science Ltd.doi:10.1016/s0065-2296(10)52015-9
Europe PMC | doi


2008

Hägglund P, Bunkenborg J, Maeda K, Svensson B. (2008)
Identification of thioredoxin disulfide targets using a quantitative proteomics approach based on isotope-coded affinity tags
J. Proteome Res. 7(12):5270-5276. doi:10.1021/pr800633y
Europe PMC | doi

Maeda K, Hägglund P, Finnie C, Svensson B, Henriksen A. (2008)
Crystal structures of barley thioredoxin h isoforms HvTrxh1 and HvTrxh2 reveal features involved in protein recognition and possibly in discriminating the isoform specificity
Protein Sci. 17(6):1015-1024. doi:10.1110/ps.083460308
Europe PMC | doi


2006

Maeda K, Hägglund P, Finnie C, Svensson B, Henriksen A. (2006)
Structural basis for target protein recognition by the protein disulfide reductase thioredoxin
Structure 14(11):1701-1710. doi:10.1016/j.str.2006.09.012
Europe PMC | doi


2005

Maeda K, Finnie C, Svensson B. (2005)
Identification of thioredoxin h-reducible disulphides in proteomes by differential labelling of cysteines: insight into recognition and regulation of proteins in barley seeds by thioredoxin h
Proteomics 5(6):1634-1644. doi:10.1002/pmic.200401050
Europe PMC | doi


2004

Finnie C, Maeda K, ØStergaard O, Bak-Jensen KS, Larsen J, Svensson B. (2004)
Aspects of the barley seed proteome during development and germination
Paper presented at the Meeting on Proteomics of Plant Proteins, Harpenden, ENGLAND, DEC 25, 2003.Biochem. Soc. Trans. 32(Pt3):517-519. doi:10.1042/bst0320517
Europe PMC | doi

Maeda K, Finnie C, Svensson B. (2004)
Cy5 maleimide labelling for sensitive detection of free thiols in native protein extracts: identification of seed proteins targeted by barley thioredoxin h isoforms
Biochem. J. 378(Pt 2):497-507. doi:10.1042/bj20031634
Europe PMC | doi


2003

Maeda K, Finnie C, ØStergaard O, Svensson B. (2003)
Identification, cloning and characterization of two thioredoxin h isoforms, HvTrxh1 and HvTrxh2, from the barley seed proteome
Eur. J. Biochem. 270(12):2633-2643. doi:10.1046/j.1432-1033.2003.03637.x
Europe PMC | doi