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Staff at EMBL

Kenji Maeda

Postdoctoral Fellow
Gavin Group

EMBL Heidelberg, Meyerhofstraße 1, 69117 Heidelberg, Germany

E-mail: send a mail

Publications

A quantitative liposome microarray to systematically characterize protein-lipid interactions. Saliba, A.E., Vonkova, I., Ceschia, S., Findlay, G.M., Maeda, K., Tischer, C., Deghou, S., van Noort, V., Bork, P., Pawson, T., Ellenberg, J. & Gavin, A.C. Nat Methods. 2014 Jan;11(1):47-50. doi: 10.1038/nmeth.2734. Epub 2013 Nov 24. Europe PMC

Interactome map uncovers phosphatidylserine transport by oxysterol-binding proteins. Maeda, K., Anand, K., Chiapparino, A., Kumar, A., Poletto, M., Kaksonen, M. & Gavin, A.C. Nature. 2013 Sep 12;501(7466):257-61. doi: 10.1038/nature12430. Epub 2013 Aug 11. Europe PMC

In vivo profiling and visualization of cellular protein-lipid interactions using bifunctional fatty acids. Haberkant, P., Raijmakers, R., Wildwater, M., Sachsenheimer, T., Brugger, B., Maeda, K., Houweling, M., Gavin, A.C., Schultz, C., van Meer, G., Heck, A.J. & Holthuis, J.C. Angew Chem Int Ed Engl. 2013 Apr 2;52(14):4033-8. doi: 10.1002/anie.201210178.Epub 2013 Feb 28. Europe PMC

The barley grain thioredoxin system - an update. Hagglund, P., Bjornberg, O., Navrot, N., Morch Jensen, J., Maeda, K., Kirkensgaard, K., Shahpiri, A., Sultan, A., Bunkenborg, J., Gubler, F., Barrero, J.M., Henriksen, A., Finnie, C. & Svensson, B. Front Plant Sci. 2013;4:151. doi: 10.3389/fpls.2013.00151. Europe PMC

Dissecting molecular interactions involved in recognition of target disulfides by the barley thioredoxin system. Bjornberg, O., Maeda, K., Svensson, B. & Hagglund, P. Biochemistry. 2012 Dec 11;51(49):9930-9. doi: 10.1021/bi301051b. Epub 2012 Nov29. Europe PMC

Structural analyses of the Slm1-PH domain demonstrate ligand binding in the non-canonical site. Anand, K., Maeda, K. & Gavin, A.C. PLoS One. 2012;7(5):e36526. Epub 2012 May 4. Europe PMC

Recent advances in charting protein-protein interaction: mass spectrometry-based approaches. Gavin, A.C., Maeda, K. & Kuhner, S. Curr Opin Biotechnol. 2011 Feb;22(1):42-9. doi: 10.1016/j.copbio.2010.09.007.Epub 2010 Oct 9. Europe PMC

A systematic screen for protein-lipid interactions in Saccharomyces cerevisiae. Gallego, O., Betts, M.J., Gvozdenovic-Jeremic, J., Maeda, K., Matetzki, C., Aguilar-Gurrieri, C., Beltran-Alvarez, P., Bonn, S., Fernandez-Tornero, C., Jensen, L.J., Kuhn, M., Trott, J., Rybin, V., Muller, C.W., Bork, P., Kaksonen, M., Russell, R.B. & Gavin, A.C. Mol Syst Biol. 2010 Nov 30;6:430. doi: 10.1038/msb.2010.87. Europe PMC

Kinetic and thermodynamic properties of two barley thioredoxin h isozymes, HvTrxh1 and HvTrxh2. Maeda, K., Hagglund, P., Bjornberg, O., Winther, J.R. & Svensson, B. FEBS Lett. 2010 Aug 4;584(15):3376-80. Epub 2010 Jun 23. Europe PMC

Molecular Recognition in NADPH-Dependent Plant Thioredoxin Systems - Catalytic Mechanisms, Structural Snapshots and Target Identifications. Hägglund, P., Kirkensgaard, K.G., Maeda, K., Finnie, C., Henriksen, A. & Svensson, B. Advances in Botanical Research: Oxidative stress and redox regulation in plants 2009 52 461-495

Identification of thioredoxin disulfide targets using a quantitative proteomics approach based on isotope-coded affinity tags. Hagglund, P., Bunkenborg, J., Maeda, K. & Svensson, B. J Proteome Res. 2008 Dec;7(12):5270-6. Europe PMC

Crystal structures of barley thioredoxin h isoforms HvTrxh1 and HvTrxh2 reveal features involved in protein recognition and possibly in discriminating the isoform specificity. Maeda, K., Hagglund, P., Finnie, C., Svensson, B. & Henriksen, A. Protein Sci. 2008 Jun;17(6):1015-24. Epub 2008 Apr 18. Europe PMC

Structural basis for target protein recognition by the protein disulfide reductase thioredoxin. Maeda, K., Hagglund, P., Finnie, C., Svensson, B. & Henriksen, A. Structure. 2006 Nov;14(11):1701-10. Europe PMC

Proteomics of disulfide and cysteine oxidoreduction.
Maeda, K., Hägglund, P., Finnie, C. and Svensson, B. Plant proteomics. Finnie, C. (Ed.) Annual Plant reviews 28, 71-97. Blackwell Publishing, Oxford, UK.

Interactions between barley α-amylases, substrates, inhibitors and regulatory proteins.
Abou Hachem, M., Bozonnet, S., Willemoës, M., Bønsager, B.C., Nielsen, M.N., Fukuda, K., Kramhøft, B., Maeda, K., Sigurskjold, B.W., Hägglund, P., Finnie, C., Mori, H., Robert, X., Jensen, M.H., Tranier, S., Aghajari, N., Haser, R. and Svensson, B. J Appl. Glycosci.

Identification of thioredoxin h-reducible disulphides in proteomes by differential labelling of cysteines: insight into recognition and regulation of proteins in barley seeds by thioredoxin h. Maeda, K., Finnie, C. & Svensson, B. Proteomics. 2005 Apr;5(6):1634-44. Europe PMC

Aspects of the barley seed proteome during development and germination. Finnie, C., Maeda, K., OStergaard, O., Bak-Jensen, K.S., Larsen, J. & Svensson, B. Biochem Soc Trans. 2004 Jun;32(Pt3):517-9. Europe PMC

Cy5 maleimide labelling for sensitive detection of free thiols in native protein extracts: identification of seed proteins targeted by barley thioredoxin h isoforms. Maeda, K., Finnie, C. & Svensson, B. Biochem J. 2004 Mar 1;378(Pt 2):497-507. Europe PMC

Identification, cloning and characterization of two thioredoxin h isoforms, HvTrxh1 and HvTrxh2, from the barley seed proteome. Maeda, K., Finnie, C., OStergaard, O. & Svensson, B. Eur J Biochem. 2003 Jun;270(12):2633-43. Europe PMC