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Staff at EMBL

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Publications

Total: 8 publication(s)

2014

Van Roey K, Uyar B, Weatheritt RJ, Dinkel H, Seiler M, Budd A, Gibson TJ, Davey NE. (2014)
Short linear motifs: ubiquitous and functionally diverse protein interaction modules directing cell regulation
Chem. Rev. 114(13):6733-6778. doi:10.1021/cr400585q
Europe PMC | doi

Dinkel H, Van Roey K, Michael S, Davey NE, Weatheritt RJ, Born D, Speck T, Krüger D, Grebnev G, Kuban M, Strumillo M, Uyar B, Budd A, Altenberg B, Seiler M, Chemes LB, Glavina J, Sánchez IE, Diella F, Gibson TJ. (2014)
The eukaryotic linear motif resource ELM: 10 years and counting
Nucleic Acids Res. 42(Database issue):D259-66. doi:10.1093/nar/gkt1047
Europe PMC | doi

Orchard S, Ammari M, Aranda B, Breuza L, Briganti L, Broackes-Carter F, Campbell NH, Chavali G, Chen C, Del-Toro N, Duesbury M, Dumousseau M, Galeota E, Hinz U, Iannuccelli M, Jagannathan S, Jimenez R, Khadake J, Lagreid A, Licata L, Lovering RC, Meldal B, Melidoni AN, Milagros M, Peluso D, Perfetto L, Porras P, Raghunath A, Ricard-Blum S, Roechert B, Stutz A, Tognolli M, van Roey K, Cesareni G, Hermjakob H. (2014)
The MIntAct project--IntAct as a common curation platform for 11 molecular interaction databases
Nucleic Acids Res. 42(Database issue):D358-63. doi:10.1093/nar/gkt1115
Europe PMC | doi


2013

Van Roey K, Dinkel H, Weatheritt RJ, Gibson TJ, Davey NE. (2013)
The switches.ELM resource: a compendium of conditional regulatory interaction interfaces
Sci Signal 6(269):rs7. doi:10.1126/scisignal.2003345
Europe PMC | doi

Van Roey K, Orchard S, Kerrien S, Dumousseau M, Ricard-Blum S, Hermjakob H, Gibson TJ. (2013)
Capturing cooperative interactions with the PSI-MI format
Database (Oxford) 2013:bat066. doi:10.1093/database/bat066
Europe PMC | doi


2012

Van Roey K, Gibson TJ, Davey NE. (2012)
Motif switches: decision-making in cell regulation
Curr. Opin. Struct. Biol. 22(3):378-385. doi:10.1016/j.sbi.2012.03.004
Europe PMC | doi

Davey NE, Van Roey K, Weatheritt RJ, Toedt G, Uyar B, Altenberg B, Budd A, Diella F, Dinkel H, Gibson TJ. (2012)
Attributes of short linear motifs
Mol Biosyst 8(1):268-281. doi:10.1039/c1mb05231d
Europe PMC | doi

Dinkel H, Michael S, Weatheritt RJ, Davey NE, Van Roey K, Altenberg B, Toedt G, Uyar B, Seiler M, Budd A, Jödicke L, Dammert MA, Schroeter C, Hammer M, Schmidt T, Jehl P, McGuigan C, Dymecka M, Chica C, Luck K, Via A, Chatr-Aryamontri A, Haslam N, Grebnev G, Edwards RJ, Steinmetz MO, Meiselbach H, Diella F, Gibson TJ. (2012)
ELM--the database of eukaryotic linear motifs
Nucleic Acids Res. 40(Database issue):D242-51. doi:10.1093/nar/gkr1064
Europe PMC | doi