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Staff at EMBL

Kim Van Roey

Bioinformatician
Gibson Team

EMBL Heidelberg, Meyerhofstra├če 1, 69117 Heidelberg, Germany

E-mail: send a mail

Publications

The MIntAct project--IntAct as a common curation platform for 11 molecular interaction databases. Orchard, S., Ammari, M., Aranda, B., Breuza, L., Briganti, L., Broackes-Carter, F., Campbell, N.H., Chavali, G., Chen, C., del-Toro, N., Duesbury, M., Dumousseau, M., Galeota, E., Hinz, U., Iannuccelli, M., Jagannathan, S., Jimenez, R., Khadake, J., Lagreid, A., Licata, L., Lovering, R.C., Meldal, B., Melidoni, A.N., Milagros, M., Peluso, D., Perfetto, L., Porras, P., Raghunath, A., Ricard-Blum, S., Roechert, B., Stutz, A., Tognolli, M., van Roey, K., Cesareni, G. & Hermjakob, H. Nucleic Acids Res. 2014 Jan;42(Database issue):D358-63. doi: 10.1093/nar/gkt1115.Epub 2013 Nov 13. Europe PMC

The eukaryotic linear motif resource ELM: 10 years and counting. Dinkel, H., Van Roey, K., Michael, S., Davey, N.E., Weatheritt, R.J., Born, D., Speck, T., Kruger, D., Grebnev, G., Kuban, M., Strumillo, M., Uyar, B., Budd, A., Altenberg, B., Seiler, M., Chemes, L.B., Glavina, J., Sanchez, I.E., Diella, F. & Gibson, T.J. Nucleic Acids Res. 2014 Jan;42(Database issue):D259-66. doi: 10.1093/nar/gkt1047.Epub 2013 Nov 7. Europe PMC

Capturing cooperative interactions with the PSI-MI format. Van Roey, K., Orchard, S., Kerrien, S., Dumousseau, M., Ricard-Blum, S., Hermjakob, H. & Gibson, T.J. Database (Oxford). 2013 Sep 25;2013:bat066. doi: 10.1093/database/bat066. Print2013. Europe PMC

The switches.ELM resource: a compendium of conditional regulatory interaction interfaces. Van Roey, K., Dinkel, H., Weatheritt, R.J., Gibson, T.J. & Davey, N.E. Sci Signal. 2013 Apr 2;6(269):rs7. doi: 10.1126/scisignal.2003345. Europe PMC

Motif switches: decision-making in cell regulation. Van Roey, K., Gibson, T.J. & Davey, N.E. Curr Opin Struct Biol. 2012 Jun;22(3):378-85. doi: 10.1016/j.sbi.2012.03.004.Epub 2012 Apr 3. Europe PMC

Attributes of short linear motifs. Davey, N.E., Van Roey, K., Weatheritt, R.J., Toedt, G., Uyar, B., Altenberg, B., Budd, A., Diella, F., Dinkel, H. & Gibson, T.J. Mol Biosyst. 2012 Jan;8(1):268-81. doi: 10.1039/c1mb05231d. Epub 2011 Sep 12. Europe PMC

ELM--the database of eukaryotic linear motifs. Dinkel, H., Michael, S., Weatheritt, R.J., Davey, N.E., Van Roey, K., Altenberg, B., Toedt, G., Uyar, B., Seiler, M., Budd, A., Jodicke, L., Dammert, M.A., Schroeter, C., Hammer, M., Schmidt, T., Jehl, P., McGuigan, C., Dymecka, M., Chica, C., Luck, K., Via, A., Chatr-Aryamontri, A., Haslam, N., Grebnev, G., Edwards, R.J., Steinmetz, M.O., Meiselbach, H., Diella, F. & Gibson, T.J. Nucleic Acids Res. 2012 Jan 1;40(D1):D242-D251. Epub 2011 Nov 21. Europe PMC