Top image

Staff at EMBL

Dr. J├╝rgen Zimmermann

Engineer for Robotics
Genomics Core Facility

EMBL Heidelberg, Meyerhofstra├če 1, 69117 Heidelberg, Germany

E-mail: send a mail

Publications

Direct and indirect effects of H-NS and Fis on global gene expression control in Escherichia coli. Kahramanoglou, C., Seshasayee, A.S., Prieto, A.I., Ibberson, D., Schmidt, S., Zimmermann, J., Benes, V., Fraser, G.M. & Luscombe, N.M. Nucleic Acids Res. 2011 Mar;39(6):2073-91. doi: 10.1093/nar/gkq934. Epub 2010 Nov21. Europe PMC

Inhibition of aurora kinases for tailored risk-adapted treatment of multiple myeloma. Hose, D., Reme, T., Meissner, T., Moreaux, J., Seckinger, A., Lewis, J.D., Benes, V., Benner, A., Hundemer, M., Hielscher, T., Shaughnessy JD, J.r, Barlogie, B., Neben, K., Kramer, A., Hillengass, J., Bertsch, U., Jauch, A., De Vos, J., Rossi, J.F., Mohler, T., Blake, J., Zimmermann, J., Klein, B. & Goldschmidt, H. Blood. 2009 Apr 30;113(18):4331-40. Epub 2009 Jan 26. Europe PMC

Automatisierte DNA-Extraktion durch Kombination von Liquid Handling und Zentrifugation. Zimmermann, J., Zinn, T., Benes, V., Ibberson, D., Boulin, C., Griebel, R., Lomax, P., Mausel, M., Schubell, U. & Gunther-Eberle, K. Laborwelt 2003 4(5) 41-42

Small is beautiful: Flexible Automatisierunginsel in der genomischen Forschung. Zimmermann, J., Schmidt, S., Benes, V., Boulin, C., Griebel, R., Lomax, P., Zinn, T., Mausel, M., Schubell, U. & Gunther-Eberle, K. Biospektrum 2003 9 764-766

5000 bases in a single sequencing reaction on ARAKIS, towards 1 mega base DNA sequencer with automated loading. Stegemann, J., Ventzki, R., Erfle, H., Schwager, C., Faulstich, K., Benes, V., Zimmermann, J., Li, Y. and Ansorge, W. In "Genome Sequencing & Biology", Abstract book, Cold Spring Harbour Laboratory, p. 222

5000 bases in a single sequencing reaction on ARAKIS, towards 1 Mega base DNA sequencer with automated loading Stegemann, J., Ventzki, R., Erfle, H., Schwager, C., Faulstich, K., Benes, V., Zimmermann, J., Li, Y. & Ansorge, W. In "AMS '99, 6th International Automation in Mapping and DNA Sequencing Conference Abstract Book", The Sanger Centre, Hinxton, Cambridge, UK, p. 25

5000 bases in a single sequencing reaction on ARAKIS, towards 1 mega base DNA sequencer with automated loading. Stegemann, J., Ventzki, R., Erfle, H., Schwager, C., Faulstich, K., Benes, V., Zimmermann, J., Li, Y. & Ansorge, W. In "Microbial and Comparative Genomics", 11th Int. Genome Sequencing and Analysis Conference, Abstract book, p. 97

Towards 1 mega base automated DNA sequencer with automated loading: cDNA and SAGE projects. Stegemann, J., Ventzki, R., Schwager, C., Benes, V., Zimmermann, J. & Ansorge, W. In "The 1998 CSH Meeting on Genome Mapping, Sequencing and Biology Abstract Book", Cold Spring Harbor, New Yrk, USA, p. 107

High throughput 1 mega base automated DNA sequencer with automated loading. Stegemann, J., Ventzki, R., Schwager, C., Benes, V., Faulstich, K., Zimmermann, J. & Ansorge, W. In "5th International Automation in Mapping and DNA Sequencing Conference Abstract Book", Washington University, 11

4000 bases in a single sequencing reaction on ARAKIS, as sequencing system for 120 clones and throughput of 120 kb per run. Stegemann, J., Ventzki, R., Faulstich, K., Benes, V., Zimmermann, J., Li, Y. & Ansorge, W. In "10th International Genome Sequencing and Analysis Conference Abstract Book", Miami Beach, Florida, C-28

Automated cycle sequencing with Taquenase: protocols for internal labeling, dye primer and "doublex" simultaneous sequencing. Voss, H., Nentwich, U., Duthie, S., Wiemann, S., Benes, V., Zimmermann, J. & Ansorge, W. Biotechniques 1997 Aug;23(2):312-8 Europe PMC

Reducing "double sequences" in automated DNA sequencing with T7 DNA polymerase and internal labeling. Wiemann, S., Schilke, A., Rechmann, S., Zimmermann, J., Voss, H. & Ansorge, W. Biotechniques 1996 May;20(5):791-2 Europe PMC

Sequencing and analysis of 51 kb on the right arm of chromosome XV from Saccharomyces cerevisiae reveals 30 open reading frames. Wiemann, S., Rechmann, S., Benes, V., Voss, H., Schwager, C., Vlcek, C., Stegemann, J., Zimmermann, J., Erfle, H., Paces, V. & Ansorge, W. Yeast 1996 Mar 15;12(3):281-8 Europe PMC

"Doublex" fluorescent DNA sequencing: two independent sequences obtained simultaneously in one reaction with internal labeling and unlabeled primers. Wiemann, S., Stegemann, J., Zimmermann, J., Voss, H., Benes, V. & Ansorge, W. Anal Biochem 1996 Feb 15;234(2):166-74 Europe PMC

Flexible automated processing systems for large scale DNA sequencing. Zimmermann, J., Schwager, C., Voss, H., Toldo, L., Drzonek, H., Stegemann, J., Erfle, H., Schilke, A. & W. Ansorge HUGO's Human Genome Meeting Heidelberg 22-24 March, p. 112. 1996

120 clones throughput automated DNA sequencing system and sequencing 500 kB of yeast genome. Ansorge, W., Stegemann, J., Ventzki, R., Zimmermann, J., Schwager, C., Benes, V., Drzonek, H., Erfle, H. & Voss, H. Genome mapping & sequencing meeting, May 8-12, 1996, Cold Spring Harbor, New York.