Towards Next-Generation Sequencing Data Integration

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Summary:

This course is aimed at advanced PhD students and post-doctoral researchers who are applying or planning to apply high throughput sequencing technologies and bioinformatics methods in their research.

Aims:

The course covers data analysis of RNA-Seq, DNA-Seq, ChIP-Seq and DNA methylation sequencing experiments, including differential expression analysis, ChIP-Seq peak detection, DNA variant detection and methylation analysis.”

Requirements:

Familiarity with the sequencing technology and biological use cases of high throughput sequencing is required, as is some experience with Linux, the Linux command line and the R Statistics package.

Topics:

• • RNA-Seq

  • ChIP-Seq

  • Whole-genome sequencing

  • Methylation analysis

  • Variant calling