Computational biology

• Useful MATLAB tools
• Tool tips for programming- Java, Unix-shell etc
• Advances in Complex Systems
• Chaos texbook online: examples, models and explanations.
• Matlab code repository
• List of Bio-simulator tools
• Postdoctoral funding sources
• 
• gnuplot the best introductory material I have found.
• Biomedical imaging group at EPFL: resources especially for image analysis

Experiments: Bench-work for a theoretical biologist- Survival Links

1. Fluorescence spectra viewer from Invitrogen. Allows you to select multiple fluorophores, and plots their activation and emission wavelengths.
2. Beckmann-centrifuges calculate G <->RPM

Biological pattern formation

• Life at Low Reynolds Numbers [PDF]
• Self-organization in Living Matter: blog
• Physics of Life: Online meta-journal
• Open WetWare- a synthetic biology initiative
• quantification tools for biological signals
• Pattern formation in development by Hans Meinhardt

Complex systems

• Notebooks of C.R.Shalizi on Complex Systems and Biology
• Hayflick's limit and Life-span limits [a debate]
• The limits to growth- club of rome report: sustainability of the earth-ecosystem
• The Earth Simulator Center for simulating planet scale climate patterns

Signalling network resources

1. list of databases

Limits to Human Pereception

George A. Miller, "The Magic Number Seven, Plus or Minus Two: Some Limits on our Capacity for Processing Information", Psychological Review, Vol. 63, No. 2, 1956. on Wikipedia

Heidelberg

Wiki and web-authoring tools

• Moin moin
• Rest2web: a python html authoring tool which converts txt to html (and more). NEEDS docutils to be first installed!