Papers

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1. Athale CA, Dinarina A, Mora-Coral M, Pugieux C, Nedelec F, Karsenti E.
   Regulation of microtubule dynamics by reaction cascades around chromosomes.
   Science. 2008 Nov 21;322(5905):1243-7.
2. Zhang L, Athale CA, Deisboeck TS.
   Development of a three-dimensional multiscale agent-based tumor model: simulating gene-protein interaction profiles, cell phenotypes and multicellular patterns in brain cancer. J Theor Biol. 2007 Jan 7;244(1):96-107. Epub 2006 Jul 27.
3. Athale CA, Deisboeck TS.
   The effects of EGF-receptor density on multiscale tumor growth patterns. J Theor Biol. 2006 Feb 21;238(4):771-9. Epub 2005 Aug 26.
4. Athale C, Mansury Y, Deisboeck TS.
   Simulating the impact of a molecular 'decision-process' on cellular phenotype and multicellular patterns in brain tumors. J Theor Biol. 2005 Apr 21;233(4):469-81. Epub 2004 Nov 30. Erratum in: J Theor Biol. 2006 Apr 21;239(4):516-7. PMID: 15748909
5. Bacher CP, Reichenzeller M, Athale C, Herrmann H, Eils R.
   4-D single particle tracking of synthetic and proteinaceous microspheres reveals preferential movement of nuclear particles along chromatin - poor tracks. BMC Cell Biol. 2004 Nov 23;5:45.
6. Athale CA, Christensen MO, Eils R, Boege F, Mielke C.
   Inferring a system model of subcellular topoisomerase II beta localization dynamics. OMICS. 2004 Summer;8(2):167-75.
7. Eils R, Athale C.
   Computational imaging in cell biology. J Cell Biol. 2003 May 12;161(3):477-81. Review.

Conference Proceedings

1. Patterning of regulatory gradients by reaction-diffusion cascades around chromosomes in Xenopus egg-extracts (Poster) CSHL/WT Computational Cell Biology, Wellcome Trust, Hinxton, Cambridge, UK. 26-30th March 2008
2. Modeling the Effect of Microtubule Stabilization Gradients on Centrosomal Spindle Assembly (Poster) Computational Cell Biology, Cold Spring Harbour Labs, USA 6-9 Mar 2007
3. Shaping a Mitotic Aster by Chemical Gradients (Poster) Biolateral Meeting, Paris, 18-19 Jan 2007
4. Poster, Principles of Self-Organization in Living Matter, EMBL Heidelberg, 2-5 Jun 2006
5. Poster, 6th European Society of Mathematical and Theoretical Biology Conference, Dresden, 18-22 Jul 2005

Other

• Athale and Deisboeck (in press) Simulating the Impact of Angiogenesis on Multiscale Tumour Growth Dynamics using an Agent-Based Model, Book chapter
• Athale C.A. Rezenssion: Essential Mathematical Biology, 5/2004, BIOspektrum. (german) [PDF]
• Athale C.A. Web report: Cell-simulations portal,
  Web report: Monte Carlo cell simulations,
  Web report: Software for cell simulation, Genome Biology