Motif/Pattern/Profile searches


This page has been developed for a review on motif and profile searches to appear in "Methods in Enzymology" 1995 (ed.R.F. Doolittle) by Peer Bork and Toby Gibson. It is not comprehensive and some of the pointers might be out of date if you touch this page. We are grateful for pointers to other motif/pattern profile searches for protein sequences.

Searchable motif and pattern databases

Motif and profile searches


WWW and FTP servers for single sequence exhaustive database searches


Some programs that can be obtained from the following ftp adresses:

ftp addresses for motif and profile search programs


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Peer Bork
Last update: June 29, 1995