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Experiments with motors and microtubules


Free Code
Java:
Dynamic Microtubule Applet

C++:
Elementary FRAP simulation using OpenGL and GLUT, developed with Jonathan Ward.

Matlab:
tiffread27.m (v2.7) imports some TIFF files into Matlab, including Metamorph and LSM stacks (Jan. 2009)
Color images are now returned in a cell-array containing a matrix for each color (a modification by Urs Utzinger).
show_image.m displays an image
show_stack.m displays a stack (using show_image.m)
image_histogram.h calculates an histogram of pixel values
image_background.m detect the background level of the image, when it is predominantly dark (using image_histogram.m)

Older versions:
tiffread26.m (v2.6) imports some TIFF files into Matlab, including Metamorph and LSM stacks (Feb. 2008)
tiffread2.m (v2.4) import TIFF files including Metamorph stacks into Matlab (Apr. 2006)
tiffread26a.m (v2.6) support for Zeiss LSM410 (John Choi, Caltech)
tiffread2b.m (v2.2) reads in addition the Metamorph camera info (Elias Beauchamp)
tiffread2c.m (v2.2) can read files from the Zeiss LSM510 (Jan-Ulrich Kreft)
tiffread2d.m (v2.2) extended metamorph support (David Kolin)

Functions to analyse microtubule dynamic instability from time-length records (2005)


Recreation
Small programs in Postscript

An Indian recipe written in French
A recipe for a French cake written in English
The recipe for French-Swiss fondue from a German-Swiss written in English