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<H1>WWW services for sequence analysis</H1>
<P><I><A HREF="mailto:schneider@lion-ag.de"><B>Reinhard Schneider</B></A> and <A HREF="http://www.embl-heidelberg.de/~rost/"><B>Burkhard Rost</B></A> (<A HREF="mailto:rost@EMBL-Heidelberg.de">rost@EMBL-Heidelberg.de</A>)</I></P>
<P><B>'<A HREF="../Papers/Springer96.html" TARGET="imgwin">Pedestrian guide to analysing sequence databases'</B></A>' (full text of book chapter introducing WWW facilities)</P>
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<H2>Table of contents</H2>
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<H3><A HREF="gen1.html">General</A></H3>
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<LI><A HREF="gen1.html#intro1"> Introductions to the World Wide Web</A>
<LI><A HREF="gen1.html#intro2a"> WWW searches</A>
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<LI><A HREF="gen1.html#intro2aGen"> WWW searches, engines</A>
<LI><A HREF="gen1.html#intro2aList"> WWW searches, list of engines</A>
<LI><A HREF="gen1.html#intro2aIndices"> WWW searches, engines and indices</A>
<LI><A HREF="gen1.html#intro2aPeople"> WWW searches, people</A>
<LI><A HREF="gen1.html#intro2b"> WWW searches, topic specific</A>
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<LI><A HREF="gen1.html#intro3"> General sites</A>
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<LI><A HREF="gen1.html#intro3Central"> Central sites (EMBL, EBI, NCBI, ExPAsy)</A>
<LI><A HREF="gen1.html#intro3America"> Groups & Univ, America</A> -
<LI><A HREF="gen1.html#intro3Europe"> Groups & Univ, Europe</A> -
<LI><A HREF="gen1.html#intro3Other"> Groups & Univ, Other</A> -
<LI><A HREF="gen1.html#intro3Org"> Organisations</A>
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<LI><A HREF="gen1.html#intro4"> Extremely useful private sites</A>
<LI><A HREF="gen2.html#intro5"> Literature (Medline) and Journals</A>
<LI><A HREF="gen2.html#intro6"> Miscellaneous sites for molecular biologists</A>
<LI><A HREF="gen2.html#intro7"> Metabolic and other pathways (genome analysis)</A>
<LI><A HREF="gen2.html#intro8"> Informations about genome projects</A>
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<LI><A HREF="gen2.html#intro8General"> General</A>
<LI><A HREF="gen2.html#intro8Arab"> Arabidopsis</A>
<LI><A HREF="gen2.html#intro8Celegans"> Celegans</A>
<LI><A HREF="gen2.html#intro8Droso"> Drosophila</A>
<LI><A HREF="gen2.html#intro8Fish"> Fish</A>
<LI><A HREF="gen2.html#intro8Human"> Human</A>
<LI><A HREF="gen2.html#intro8Yeast"> Yeast</A>
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<H3><A HREF="db1.html">Databases</A></H3>
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<LI><A HREF="db1.html#database1"> Db, general</A> -
<LI><A HREF="db1.html#dbMis"> Db, miscellaneous</A> -
<LI><A HREF="db1.html#database2"> Db, nucleotide sequences</A> -
<LI><A HREF="db1.html#database3"> Db, protein sequence information</A> -
<LI><A HREF="db1.html#database4"> Db, protein structure information</A>
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<H3><A HREF="srv1.html">Services</A></H3>
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<LI><A HREF="srv1.html#service0"> Hotlists</A>
<LI><A HREF="srv1.html#service1"> Services, general</A>
<LI><A HREF="srv1.html#service2"> Services, alignments and database searches</A>
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<LI><A HREF="srv1.html#service2central">Central sites</A>
<LI><A HREF="srv1.html#service2fast"> Fast database searches</A>
<LI><A HREF="srv1.html#service2full"> Full dynamic programming</A>
<LI><A HREF="srv1.html#service2prof"> Refinement by profile-based analysis</A>
<LI><A HREF="srv1.html#service2hmm"> Refinement by hidden Markov models</A>
<LI><A HREF="srv1.html#service2display">Analysing and displaying alignments</A>
<LI><A HREF="srv1.html#service2motifs"> Finding motifs</A>
<LI><A HREF="srv1.html#service2bias"> Analysing composition bias</A>
<LI><A HREF="srv1.html#service2other"> Other services for sequence analysis</A>
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<LI><A HREF="srv1.html#service3"> Services, analysing nucleotide sequences</A>
<LI><A HREF="srv1.html#service4"> Services, protein structure prediction</A>
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<LI><A HREF="srv1.html#service4central">Collection of tools</A>
<LI><A HREF="srv1.html#service4sec"> Secondary structure prediction</A>
<LI><A HREF="srv1.html#service4cd"> Secondary structure from CD</A>
<LI><A HREF="srv1.html#service4acc"> Solvent accessibility prediction</A>
<LI><A HREF="srv1.html#service4htm"> Transmembrane helix and signal peptide prediction</A>
<LI><A HREF="srv1.html#service4coil"> Prediction of coiled-coils</A>
<LI><A HREF="srv1.html#service4glyco"> Prediction of O-glycosylation sites</A>
<LI><A HREF="srv1.html#service4hm"> Homology modelling</A>
<LI><A HREF="srv1.html#service4thread"> Threading</A>
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<H3>Software</H3>
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<LI><A HREF="soft1.html"> Software</A>
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<LI><A HREF="soft1.html#softGen"> General</A><BR></LI>
<LI><A HREF="soft1.html#softDoc"> Documentation</A><BR></LI>
<LI><A HREF="soft1.html#soft3D"> Protein structure/NMR</A><BR></LI>
<LI><A HREF="soft1.html#softAli"> Alignments</A><BR></LI>
<LI><A HREF="soft1.html#softHomo"> Homology modelling</A><BR></LI>
<LI><A HREF="soft1.html#softThread"> Threading</A><BR></LI>
<LI><A HREF="soft1.html#softHomoCom"> Homology modelling (Commercial)<BR></LI>
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