Domains within Homo sapiens protein UPI00001F95A1

transcription factor LBX1

Size
BubblogramUnknown region: 1 to 55low complexity region: 56 to 67Unknown region: 68 to 124HOX: 125 to 187Unknown region: 188 to 219low complexity region: 220 to 226Unknown region: 227 to 237low complexity region: 238 to 249Unknown region: 250 to 269low complexity region: 270 to 281
Loading domain annotation...

Mouse over domain / undefined region for more info; click on it to go to detailed annotation; right-click to save whole protein as PNG image
Transmembrane segments as predicted by the TMHMM2 program ( TRANS ), coiled coil regions determined by the Coils2 program ( COIL ), segments of low compositional complexity determined by the SEG program ( SEG ). Signal peptides determined by the SignalP program ( SIGNAL ). Intron positions are indicated with vertical lines showing the intron phase and exact position in AA.

Additional information
Display other IDs, orthology and alternative splicing data for this sequence.
Domain architecture analysis
This domain architecture was probably invented with the emergence of cellular organisms.
Display all proteins with similar domain organisation.
Display all proteins with similar domain composition.

The SMART diagram above represents a summary of the results shown below. Domains with scores less significant than established cutoffs are not shown in the diagram. Features are also not shown when two or more occupy the same piece of sequence; the priority for display is given by SMART > PFAM > PROSPERO repeats > Signal peptide > Transmembrane > Coiled coil > Unstructured regions > Low complexity. In either case, features not shown in the above diagram are marked as 'overlap' in the second table below.

Confidently predicted domains, repeats, motifs and features:

NameBeginEndE-value
low complexity5667-
HOX1251874.93e-26
low complexity220226-
low complexity238249-
low complexity270281-

These features and domains are not shown in the diagram, either because their scores are less significant than the required threshold, or because they overlap with some other source of annotation:

NameBeginEndE-valueReason
Pfam:Homeobox1261824.60e-29overlap
coiled coil168197-overlap

Run BLAST with part of submitted sequence:
Start: End: