Links to Bioinformatics Software Resources


Contents:

Sites Listing Bioinformatics Resources

Multiple Sequence Alignments (MSAs) And Phylogenies - SOFTWARE

Protein Modular Architecture Analysis


Bioinformatics Resource Listings

Pairwise sequence alignment

Pairwise 3D structural alignment

3D Protein Structure Databases

Resources/Databases providing pre-calculated multiple sequence alignments

Multiple Sequence Alignment Servers

Multiple Sequence Alignment Reference Sets

Locally Installed Software

Dendroscope (JAVA Phylogeny/Tree Viewer)

NJPLOT

CLUSTALX

SEAVIEW

JALVIEW

PyMOL

MESQUITE

Modular Protein Architecture Analysis

Simultaneous estimation of alignment and phylogeny

Phylogeny-Related Servers

Databases/Resources exploring known trees

Phylogeny software


Back to Gibson Team course pages at EMBL.