Structure Alignment 1PPR:M 1GVK:B

1PPR:M(size=312) vs 1GVK:B(size=240)
Structure Alignment

Rmsd = 8.2Å Z-Score = 1.2
Sequence identity = 6.7%
Aligned/gap positions = 104/146

Sequence alignment based on structure alignment. Sequence alignment based on structure alignment. Position numbers according to sequence (starting from 1) and according to PDB are given as SSSS/PPPP, SSSS - sequence, PPPP - PDB.

1PPR:M - MOL_ID: 1; MOLECULE: PERIDININ-CHLOROPHYLL PROTEIN; CHAIN: M, N, O; SYNONYM: PCP

1GVK:B - MOL_ID: 1; MOLECULE: PEPTIDE INHIBITOR; SYNONYM: N-AC-NPI-CO2H; CHAIN: A; MOL_ID: 2; MOLECULE: ELASTASE 1; CHAIN: B; EC: 3.4.21.36

1PPR:M 33/34 GKLQPLEALKAIDKMIV---------------MGAAADPKLLKAAAEAHHKAIG------ 1GVK:B 2/18 VGGTEAQR-NSWPSQISLQYRSGSSWAHTCGGTLIRQN---WVMTAAHCVDRELTFRVVV 1PPR:M 72/73 ------------------------SISGPNGVTSRADWDNVNAALGRVIASVPENMVMDV 1GVK:B 58/70 GEHNLNQNNGTEQYVGVQKIVVHPY------WNTDDVAAGYDIALL----RLAQSVTLNS 1PPR:M 108/109 YDSVS------------------------------KITDPKVP----------------- 1GVK:B 108/118 YVQLGVLPRAGTILANNSPCYITGWGLTRTNGQLAQTLQQAYLPTVDYAICSSSSYWGST 1PPR:M 121/122 --------AYMKS-----------------------------LVNGA---DAEKAYEGFL 1GVK:B 168/177 VKNSMVCAGGDGVRSGCQGDSGGPLHCLVNGQYAVHGVTSFVSRLGCNVTRKPTVFTRVS 1PPR:M 141/142 AFKDVVKKSQ 1GVK:B 228/234 AYISWINNVI

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