Align 1pdk_b.pdb 149 with 1n12_a.pdb 138
Twists 0 ini-len 104 ini-rmsd 2.50 opt-equ 132 opt-rmsd 3.06 chain-rmsd 2.50 Score 194.89 align-len 152 gaps 20 (13.16%)
P-value 7.88e-08 Afp-num 6884 Identity 13.16% Similarity 28.29%
Block  0 afp 13 score 194.89 rmsd  2.50 gap 37 (0.26%)

                  .    :    .    :    .    :    .    :    .    :    .    :    .    :
Chain 1:   12 RPCHVSGDSLNKHVVFKTRASRDFWYPPGRSPTESFVIRLENCHATAVGKIVTLTFKGTEEAALPGHLKV
              11111   1111111111111111 11111111111111111111111    1111111111  111111
Chain 2:    1 VPACT---VSNTTVDWQDVEIQTL-SQNGNHEKEFTVNMRCPYNLGTM----KVTITATNTY--NNAILV

                  .    :    .    :    .    :    .    :    .    :    .    :    .    :
Chain 1:   82 TGVN---AGRLGIALLDTD---GSSLLKPGTSHNKGQGEKVTGNSLELPFGAYVVATPEALRTKSVVPGD
              1111   111111111111   11111111111 11111111111111111111111111   1111111
Chain 2:   72 QNTSNTSSDGLLVYLYNSNAGNIGTAITLGTPF-TPGKITGNNADKTISLHAKLGYKGNM---QNLIAGP

                  .    :
Chain 1:  146 YEATATFELTYR
              111111111111
Chain 2:  138 FSATATLVASYS

Note: positions are from PDB; the numbers between alignments are block index