MSA Exercises

Aidan Budd and Tomas Larsson

"Manual" Alignments using JalView

Structure-Based Interpretation of Alignments

Exampes of Non-Equivalence of Evolutionary and Structural Alignment

Obtaining Pre-Calculated Alignments

Compring Automatic Alignment Tools to a Reference Alignment

MSA Analysis from Start to Finish

Comparing Results from Different Automatic MSA Tools

Comparing Sequence and Structural Alignments

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