EMBL Heidelberg, Meyerhofstraße 1, 69117 Heidelberg, Germany
ORCID iD: 0000-0001-7999-6127
Biography
PhD 2011, IGBMC, Strasbourg, France.
Postdoctoral research at Friedrich Miescher Institute, Basel, Switzerland
Ambizione independent fellow at Friedrich Miescher Institute, Basel, Switzerland
Group leader at EMBL since January 2018.
Publications
Total: 19 publication(s)
2021
Sönmezer C, Kleinendorst R, Imanci D, Barzaghi G, Villacorta L, Schübeler D, Benes V, Molina N, Krebs AR. (2021)
Molecular co-occupancy identifies transcription factor binding cooperativity in vivo.
Mol Cell 81(2):255-267. doi: 10.1016/j.molcel.2020.11.015
Europe PMC | doi
2020
Ginno PA, Gaidatzis D, Feldmann A, Hoerner L, Imanci D, Burger L, Zilbermann F, Peters AHFM, Edenhofer F, Smallwood SA, Krebs AR, Schübeler D. (2020)
A genome-scale map of DNA methylation turnover identifies site-specific dependencies of DNMT and TET activity.
Nat Commun 11(1) doi: 10.1038/s41467-020-16354-x
Europe PMC | doi
Vonesch SC, Bredikhin D, Dobrev N, Villacorta L, Kleinendorst R, Cacace E, Flock J, Frank M, Jung F, Kornienko J, Mitosch K, Osuna-Lopez M, Zimmermann J, Goettig S, Hamprecht A, Kraeusslich H, Knop M, Typas A, Steinmetz LM, Benes V, Remans K, Krebs AR. (2020)
McQ – an open-source multiplexed SARS-CoV-2 quantification platform.
medRxiv preprint doi: 10.1101/2020.12.02.20242628
doi
2019
Jüttner J, Szabo A, Gross-Scherf B, Morikawa RK, Rompani SB, Hantz P, Szikra T, Esposti F, Cowan CS, Bharioke A, Patino-Alvarez CP, Keles Ö, Kusnyerik A, Azoulay T, Hartl D, Schübeler D, Krebs AR, Lukats A, Hajdu RI, Nagy ZZ, Nemeth J, Wu RH, Wu KC, Fang XL, Xiang L, Goldblum D, Jin ZB, Scholl HPN, Hasler PW, Roska B, Krol J. (2019)
Targeting neuronal and glial cell types with synthetic promoter AAVs in mice, non-human primates and humans.
Nat. Neurosci. 22(8):1345-1356. doi: 10.1038/s41593-019-0431-2
Europe PMC | doi
2017
Hartl D, Krebs AR, Jüttner J, Roska B, Schübeler D. (2017)
Cis-regulatory landscapes of four cell types of the retina.
Nucleic Acids Res 45(20):11607-11621. doi: 10.1093/nar/gkx923
Europe PMC | doi
Krebs AR, Imanci D, Hoerner L, Gaidatzis D, Burger L, Schübeler D. (2017)
Genome-wide Single-Molecule Footprinting Reveals High RNA Polymerase II Turnover at Paused Promoters.
Mol Cell 67(3):411-422.e4. doi: 10.1016/j.molcel.2017.06.027
Europe PMC | doi
2015
Baubec T, Colombo DF, Wirbelauer C, Schmidt J, Burger L, Krebs AR, Akalin A, Schübeler D. (2015)
Genomic profiling of DNA methyltransferases reveals a role for DNMT3B in genic methylation
Nature 520(7546):243-278. doi: 10.1038/nature14176
Europe PMC | doi
2014
Ye T, Ravens S, Krebs AR, Tora L. (2014)
Interpreting and visualizing ChIP-seq data with the seqMINER software.
Methods Mol Biol 1150:141-52. doi: 10.1007/978-1-4939-0512-6_8
Europe PMC | doi
Krebs AR, Dessus-Babus S, Burger L, Schübeler D. (2014)
High-throughput engineering of a mammalian genome reveals building principles of methylation states at CG rich regions
Elife 3 doi: 10.7554/eLife.04094
Europe PMC | doi
2012
Krebs AR, Schübeler D. (2012)
Tracking the evolution of cancer methylomes
Nat Genet 44(11):1173-1174. doi: 10.1038/ng.2451
Europe PMC | doi
2011
Krebs AR, Karmodiya K, Lindahl-Allen M, Struhl K, Tora L. (2011)
SAGA and ATAC Histone Acetyl Transferase Complexes Regulate Distinct Sets of Genes and ATAC Defines a Class of p300-Independent Enhancers
Mol Cell 44(3):410-423. doi: 10.1016/j.molcel.2011.08.037
Europe PMC | doi
Ye T, Krebs AR, Choukrallah MA, Keime C, Plewniak F, Davidson I, Tora L. (2011)
seqMINER: an integrated ChIP-seq data interpretation platform
Nucleic Acids Res 39(6) doi: 10.1093/nar/gkq1287
Europe PMC | doi
2010
Anamika K, Krebs AR, Thompson J, Poch O, Devys D, Tora L. (2010)
Lessons from genome-wide studies: an integrated definition of the coactivator function of histone acetyl transferases
Epigenetics Chromatin 3(1) doi: 10.1186/1756-8935-3-18
Europe PMC | doi
Martianov I, Choukrallah MA, Krebs A, Ye T, Legras S, Rijkers E, Van Ijcken W, Jost B, Sassone-Corsi P, Davidson I. (2010)
Cell-specific occupancy of an extended repertoire of CREM and CREB binding loci in male germ cells
BMC Genomics 11 doi: 10.1186/1471-2164-11-530
Europe PMC | doi
Orpinell M, Fournier M, Riss A, Nagy Z, Krebs AR, Frontini M, Tora L. (2010)
The ATAC acetyl transferase complex controls mitotic progression by targeting non-histone substrates
EMBO J 29(14):2381-2394. doi: 10.1038/emboj.2010.125
Europe PMC | doi
Krebs AR, Demmers J, Karmodiya K, Chang NC, Chang AC, Tora L. (2010)
ATAC and Mediator coactivators form a stable complex and regulate a set of non-coding RNA genes
EMBO Rep 11(7):541-547. doi: 10.1038/embor.2010.75
Europe PMC | doi
Nagy Z, Riss A, Fujiyama S, Krebs A, Orpinell M, Jansen P, Cohen A, Stunnenberg HG, Kato S, Tora L. (2010)
The metazoan ATAC and SAGA coactivator HAT complexes regulate different sets of inducible target genes
Cell Mol Life Sci 67(4):611-628. doi: 10.1007/s00018-009-0199-8
Europe PMC | doi
2009
Krebs A, Tora L. (2009)
Keys to Open Chromatin for Transcription Activation: FACT and Asf1
Mol Cell 34(4):397-399. doi: 10.1016/j.molcel.2009.05.004
Europe PMC | doi
2008
Krebs A, Frontini M, Tora L. (2008)
GPAT: Retrieval of genomic annotation from large genomic position datasets
BMC Bioinformatics 9 doi: 10.1186/1471-2105-9-533
Europe PMC | doi