EMBL Heidelberg, Meyerhofstraße 1, 69117 Heidelberg, Germany


Total: 16 publication(s)


Woerner SM, Tosti E, Yuan YP, Kloor M, Bork P, Edelmann W, Gebert J. (2014)

Detection of coding microsatellite frameshift mutations in DNA mismatch repair-deficient mouse intestinal tumors

Mol. Carcinog. 54(11) doi: 10.1002/mc.22213
Europe PMC | doi


Woerner SM, Yuan YP, Benner A, Korff S, von Knebel Doeberitz M, Bork P. (2010)

SelTarbase, a database of human mononucleotide-microsatellite mutations and their potential impact to tumorigenesis and immunology

Nucleic Acids Res. 38(Database issue):D682-9. doi: 10.1093/nar/gkp839
Europe PMC | doi


Roeckel N, Woerner SM, Kloor M, Yuan YP, Patsos G, Gromes R, Kopitz J, Gebert J. (2009)

High frequency of LMAN1 abnormalities in colorectal tumors with microsatellite instability

Cancer Res. 69(1):292-299. doi: 10.1158/0008-5472.can-08-3314
Europe PMC | doi


Korff S, Woerner SM, Yuan YP, Bork P, von Knebel Doeberitz M, Gebert J. (2008)

Frameshift mutations in coding repeats of protein tyrosine phosphatase genes in colorectal tumors with microsatellite instability

BMC Cancer 8:329. doi: 10.1186/1471-2407-8-329
Europe PMC | doi


Woerner SM, Benner A, Sutter C, Schiller M, Yuan YP, Keller G, Bork P, Doeberitz Mv, Gebert JF. (2003)

Pathogenesis of DNA repair-deficient cancers: a statistical meta-analysis of putative Real Common Target genes

Oncogene 22(15):2226-2235. doi: 10.1038/sj.onc.1206421
Europe PMC | doi


Fredman D, Siegfried M, Yuan YP, Bork P, Lehväslaiho H, Brookes AJ. (2002)

HGVbase: a human sequence variation database emphasizing data quality and a broad spectrum of data sources

Nucleic Acids Res. 30(1):387-391. doi: 10.1093/nar/30.1.387
Europe PMC | doi


Linnebacher M, Gebert J, Rudy W, Woerner S, Yuan YP, Bork P, von Knebel Doeberitz M. (2001)

Frameshift peptide-derived T-cell epitopes: a source of novel tumor-specific antigens

Int. J. Cancer 93(1):6-11. doi: 10.1002/ijc.1298
Europe PMC | doi

Woerner SM, Gebert J, Yuan YP, Sutter C, Ridder R, Bork P, von Knebel Doeberitz M. (2001)

Systematic identification of genes with coding microsatellites mutated in DNA mismatch repair-deficient cancer cells

Int. J. Cancer 93(1):12-19. doi: 10.1002/ijc.1299
Europe PMC | doi


Dandekar T, Huynen M, Regula JT, Ueberle B, Zimmermann CU, Andrade MA, Doerks T, Sánchez-Pulido L, Snel B, Suyama M, Yuan YP, Herrmann R, Bork P. (2000)

Re-annotating the Mycoplasma pneumoniae genome sequence: adding value, function and reading frames

Nucleic Acids Res. 28(17):3278-3288. doi: 10.1093/nar/28.17.3278
Europe PMC | doi

Eisenhaber B, Bork P, Yuan YP, Löffler G, Eisenhaber F. (2000)

Automated annotation of GPI anchor sites: case study C. elegans.

Trends in Biochemical Sciences 25(7):340-341. doi: 10.1016/S0968-0004(00)01601-7
Europe PMC | doi

Sánchez-Pulido L, Yuan YP, Andrade MA, Bork P. (2000)

NAIL-Network Analysis Interface for Linking HMMER results

Bioinformatics 16(7):656-657. doi: 10.1093/bioinformatics/16.7.656
Europe PMC | doi

Brookes AJ, Lehväslaiho H, Siegfried M, Boehm JG, Yuan YP, Sarkar CM, Bork P, Ortigao F. (2000)

HGBASE: a database of SNPs and other variations in and around human genes

Nucleic Acids Res. 28(1):356-360. doi: 10.1093/nar/28.1.356
Europe PMC | doi


Bork P, Dandekar T, Diaz-Lazcoz Y, Eisenhaber F, Huynen M, Yuan Y. (1998)

Predicting function: from genes to genomes and back

J. Mol. Biol. 283(4):707-725. doi: 10.1006/jmbi.1998.2144
Europe PMC | doi

Huynen M, Doerks T, Eisenhaber F, Orengo C, Sunyaev S, Yuan Y, Bork P. (1998)

Homology-based fold predictions for Mycoplasma genitalium proteins

J. Mol. Biol. 280(3):323-326. doi: 10.1006/jmbi.1998.1884
Europe PMC | doi

Yuan YP, Eulenstein O, Vingron M, Bork P. (1998)

Towards detection of orthologues in sequence databases

Paper presented at the German Conference on Bioinformatics (GCB 97), KLOSTER IRSEE, GERMANY, SEP, 1997.Bioinformatics 14(3):285-289. doi: 10.1093/bioinformatics/14.3.285
Europe PMC | doi


Yuan YP, Schultz J, Mlodzik M, Bork P. (1997)

Secreted fringe-like signaling molecules may be glycosyltransferases

Cell 88(1):9-11. doi: 10.1016/s0092-8674(00)81852-8
Europe PMC | doi