Custom software, plugins and macros written by ALMF staff
Image analysis and visualisation
- FiJi (based on ImageJ) - Open source image analysis software with large user and developer community.
- Cellprofiler - Open source image analysis for large datasets (high-throughput)
- Imaris (Bitplane / Oxford Instruments): Commercial 4D analysis and visualization tool. We offer several floating licenses.
Viewer of microscopy companies
- FRAPAnalyser (A. Halavatyi et al.)
- EasyFRAP (Koulouras et al 2018, University of Patras, Greece)
- FrapCalc (IgorPro procedure to analyze FRAP data by K. Miura)
Conversion and viewing tools