Hill F, Gemünd C, Benes V, Ansorge W, Gibson TJ. (2000)

An estimate of large-scale sequencing accuracy

EMBO Rep. 1(1):29-31. doi: 10.1093/embo-reports/kvd015
Europe PMC | doi

De Michelis S, Sewell HS, Collares-Pereira M, Santos-Reis M, Schouls LM, Benes V, Holmes EC, Kurtenbach K. (2000)

Genetic diversity of Borrelia burgdorferi sensu lato in ticks from mainland Portugal

J. Clin. Microbiol. 38(6):2128-2133.
Europe PMC

Dimopoulos G, Casavant TL, Chang S, Scheetz T, Roberts C, Donohue M, Schultz J, Benes V, Bork P, Ansorge W, Soares MB, Kafatos FC. (2000)

Anopheles gambiae pilot gene discovery project: identification of mosquito innate immunity genes from expressed sequence tags generated from immune-competent cell lines

Proc. Natl. Acad. Sci. U.S.A. 97(12):6619-6624. doi: 10.1073/pnas.97.12.6619
Europe PMC | doi

Wambutt R, Murphy G, Volckaert G, Pohl T, Düsterhöft A, Stiekema W, Entian KD, Terryn N, Harris B, Ansroge W, Brandt P, Grivell L, Rieger M, Weichselgartner M, de Simone V, Obermaier B, Mache R, Müller M, Kreis M, Delseny M, Puigdomenech P, Watson M, Schmidtheini T, Reichert B, Portatelle D, Perez-Alonso M, Bountry M, Bancroft I, Vos P, Hoheisel J, Zimmermann W, Wedler H, Ridley P, Langham SA, McCullagh B, Bilham L, Robben J, Van der Schueren J, Grymonprez B, Chuang YJ, Vandenbussche F, Braeken M, Weltjens I, Voet M, Bastiens I, Aert R, Defoor E, Weitzenegger T, Bothe G, Rose M. (2000)

Progress in Arabidopsis genome sequencing and functional genomics

Paper presented at the 1st European Symposium on Applied Genome Research, BRUSSELS, BELGIUM, NOV 27, 1998.J. Biotechnol. 78(3):281-292. doi: 10.1016/s0168-1656(00)00195-4
Europe PMC | doi

Hill F, Benes V, Thomasova D, Stewart AF, Kafatos FC, Ansorge W. (2000)

BAC trimming: minimizing clone overlaps

Genomics 64(1):111-113. doi: 10.1006/geno.1999.6106
Europe PMC | doi

Kolmerer B, Clayton J, Benes V, Allen T, Ferguson C, Leonard K, Weber U, Knekt M, Ansorge W, Labeit S, Bullard B. (2000)

Sequence and expression of the kettin gene in Drosophila melanogaster and Caenorhabditis elegans

J. Mol. Biol. 296(2):435-448. doi: 10.1006/jmbi.1999.3461
Europe PMC | doi

Stopa M, Benes V, Ansorge W, Gressner AM, Dooley S. (2000)

Genomic locus and promoter region of rat Smad7, an important antagonist of TGFbeta signaling

Mamm. Genome 11(2):169-176. doi: 10.1007/s003350010032
Europe PMC | doi

Mayer K, Schüller C, Wambutt R, Murphy G, Volckaert G, Pohl T, Düsterhöft A, Stiekema W, Entian KD, Terryn N, Harris B, Ansorge W, Brandt P, Grivell L, Rieger M, Weichselgartner M, de Simone V, Obermaier B, Mache R, Müller M, Kreis M, Delseny M, Puigdomenech P, Watson M, Schmidtheini T, Reichert B, Portatelle D, Perez-Alonso M, Boutry M, Bancroft I, Vos P, Hoheisel J, Zimmermann W, Wedler H, Ridley P, Langham SA, McCullagh B, Bilham L, Robben J, Van der Schueren J, Grymonprez B, Chuang YJ, Vandenbussche F, Braeken M, Weltjens I, Voet M, Bastiaens I, Aert R, Defoor E, Weitzenegger T, Bothe G, Ramsperger U, Hilbert H, Braun M, Holzer E, Brandt A, Peters S, van Staveren M, Dirske W, Mooijman P, Klein Lankhorst R, Rose M, Hauf J, Kötter P, Berneiser S, Hempel S, Feldpausch M, Lamberth S, Van den Daele H, De Keyser A, Buysshaert C, Gielen J, Villarroel R, De Clercq R, Van Montagu M, Rogers J, Cronin A, Quail M, Bray-Allen S, Clark L, Doggett J, Hall S, Kay M, Lennard N, McLay K, Mayes R, Pettett A, Rajandream MA, Lyne M, Benes V, Rechmann S, Borkova D, Blöcker H, Scharfe M, Grimm M, Löhnert TH, Dose S, de Haan M, Maarse A, Schäfer M, Müller-Auer S, Gabel C, Fuchs M, Fartmann B, Granderath K, Dauner D, Herzl A, Neumann S, Argiriou A, Vitale D, Liguori R, Piravandi E, Massenet O, Quigley F, Clabauld G, Mündlein A, Felber R, Schnabl S, Hiller R, Schmidt W, Lecharny A, Aubourg S, Chefdor F, Cooke R, Berger C, Montfort A, Casacuberta E, Gibbons T, Weber N, Vandenbol M, Bargues M, Terol J, Torres A, Perez-Perez A, Purnelle B, Bent E, Johnson S, Tacon D, Jesse T, Heijnen L, Schwarz S, Scholler P, Heber S, Francs P, Bielke C, Frishman D, Haase D, Lemcke K, Mewes HW, Stocker S, Zaccaria P, Bevan M, Wilson RK, de la Bastide M, Habermann K, Parnell L, Dedhia N, Gnoj L, Schutz K, Huang E, Spiegel L, Sehkon M, Murray J, Sheet P, Cordes M, Abu-Threideh J, Stoneking T, Kalicki J, Graves T, Harmon G, Edwards J, Latreille P, Courtney L, Cloud J, Abbott A, Scott K, Johnson D, Minx P, Bentley D, Fulton B, Miller N, Greco T, Kemp K, Kramer J, Fulton L, Mardis E, Dante M, Pepin K, Hillier L, Nelson J, Spieth J, Ryan E, Andrews S, Geisel C, Layman D, Du H, Ali J, Berghoff A, Jones K, Drone K, Cotton M, Joshu C, Antonoiu B, Zidanic M, Strong C, Sun H, Lamar B, Yordan C, Ma P, Zhong J, Preston R, Vil D, Shekher M, Matero A, Shah R, Swaby IK, O'Shaughnessy A, Rodriguez M, Hoffmann J, Till S, Granat S, Shohdy N, Hasegawa A, Hameed A, Lodhi M, Johnson A, Chen E, Marra M, Martienssen R, McCombie WR. (1999)

Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana

Nature 402(6763):769-777. doi: 10.1038/47134
Europe PMC | doi

Valcárcel R, Weber U, Jackson DB, Benes V, Ansorge W, Bohmann D, Mlodzik M. (1999)

Sec61beta, a subunit of the protein translocation channel, is required during Drosophila development

J. Cell. Sci. 112 ( Pt 23)(23):4389-4396.
Europe PMC

Kal AJ, van Zonneveld AJ, Benes V, van den Berg M, Koerkamp MG, Albermann K, Strack N, Ruijter JM, Richter A, Dujon B, Ansorge W, Tabak HF. (1999)

Dynamics of gene expression revealed by comparison of serial analysis of gene expression transcript profiles from yeast grown on two different carbon sources

Mol. Biol. Cell 10(6):1859-1872. doi: 10.1091/mbc.10.6.1859
Europe PMC | doi

Kalousová A, Benes V, Paces J, Paces V, Kozmik Z. (1999)

DNA binding and transactivating properties of the paired and homeobox protein Pax4

Biochem. Biophys. Res. Commun. 259(3):510-518. doi: 10.1006/bbrc.1999.0809
Europe PMC | doi

Crucitti P, Lázaro JM, Benes V, Salas M. (1998)

Bacteriophage phi29 early protein p17 is conditionally required for the first rounds of viral DNA replication

Paper presented at the Symposium entitled a Wisconsin Gathering Honoring Waclaw Szybalski, MADISON, WISCONSIN, AUG 10-11, 1997.Gene 223(1-2):135-142. doi: 10.1016/s0378-1119(98)00167-x
Europe PMC | doi

Rørth P, Szabo K, Bailey A, Laverty T, Rehm J, Rubin GM, Weigmann K, Milán M, Benes V, Ansorge W, Cohen SM. (1998)

Systematic gain-of-function genetics in Drosophila

Development 125(6):1049-1057.
Europe PMC

Bevan M, Bancroft I, Bent E, Love K, Goodman H, Dean C, Bergkamp R, Dirkse W, Van Staveren M, Stiekema W, Drost L, Ridley P, Hudson SA, Patel K, Murphy G, Piffanelli P, Wedler H, Wedler E, Wambutt R, Weitzenegger T, Pohl TM, Terryn N, Gielen J, Villarroel R, De Clerck R, Van Montagu M, Lecharny A, Auborg S, Gy I, Kreis M, Lao N, Kavanagh T, Hempel S, Kotter P, Entian KD, Rieger M, Schaeffer M, Funk B, Mueller-Auer S, Silvey M, James R, Montfort A, Pons A, Puigdomenech P, Douka A, Voukelatou E, Milioni D, Hatzopoulos P, Piravandi E, Obermaier B, Hilbert H, Düsterhöft A, Moores T, Jones JD, Eneva T, Palme K, Benes V, Rechman S, Ansorge W, Cooke R, Berger C, Delseny M, Voet M, Volckaert G, Mewes HW, Klosterman S, Schueller C, Chalwatzis N. (1998)

Analysis of 1.9 Mb of contiguous sequence from chromosome 4 of Arabidopsis thaliana

Nature 391(6666):485-488. doi: 10.1038/35140
Europe PMC | doi

Petrzik K, Benes V, Mráz I, Honetslegrová-Fránová J, Ansorge W, Spak J. (1998)

Strawberry vein banding virus--definitive member of the genus Caulimovirus

Virus Genes 16(3):303-305. doi: 10.1023/a:1008039024963
Europe PMC | doi

Pecenková T, Benes V, Paces J, Vlcek C, Paces V. (1997)

Bacteriophage B103: complete DNA sequence of its genome and relationship to other Bacillus phages

Gene 199(1-2):157-163. doi: 10.1016/s0378-1119(97)00363-6
Europe PMC | doi

Voss H, Nentwich U, Duthie S, Wiemann S, Benes V, Zimmermann J, Ansorge W. (1997)

Automated cycle sequencing with Taquenase: protocols for internal labeling, dye primer and "doublex" simultaneous sequencing

BioTechniques 23(2):312-318.
Europe PMC

Benes V, Kilger C, Voss H, Pääbo S, Ansorge W. (1997)

Direct primer walking on P1 plasmid DNA

BioTechniques 23(1):98-100. doi: 10.2144/97231bm21
Europe PMC | doi

Erfle H, Ventzki R, Voss H, Rechmann S, Benes V, Stegemann J, Ansorge W. (1997)

Simultaneous loading of 200 sample lanes for DNA sequencing on vertical and horizontal, standard and ultrathin gels

Nucleic Acids Res. 25(11):2229-2230. doi: 10.1093/nar/25.11.2229
Europe PMC | doi

Voss H, Benes V, Andrade MA, Valencia A, Rechmann S, Teodoru C, Schwager C, Paces V, Sander C, Ansorge W. (1997)

DNA sequencing and analysis of 130 kb from yeast chromosome XV

Yeast 13(7):655-672. doi: 10.1002/(sici)1097-0061(19970615)13:7<655::aid-yea120>3.0.co;2-i
Europe PMC | doi

Bussey H, Storms RK, Ahmed A, Albermann K, Allen E, Ansorge W, Araujo R, Aparicio A, Barrell B, Badcock K, Benes V, Botstein D, Bowman S, Brückner M, Carpenter J, Cherry JM, Chung E, Churcher C, Coster F, Davis K, Davis RW, Dietrich FS, Delius H, DiPaolo T, Hani J. (1997)

The nucleotide sequence of Saccharomyces cerevisiae chromosome XVI

Nature 387(6632 Suppl):103-105. doi: 10.1038/387s103
Europe PMC | doi

Dujon B, Albermann K, Aldea M, Alexandraki D, Ansorge W, Arino J, Benes V, Bohn C, Bolotin-Fukuhara M, Bordonné R, Boyer J, Camasses A, Casamayor A, Casas C, Chéret G, Cziepluch C, Daignan-Fornier B, Dang DV, de Haan M, Delius H, Durand P, Fairhead C, Feldmann H, Gaillon L, Kleine K. (1997)

The nucleotide sequence of Saccharomyces cerevisiae chromosome XV

Nature 387(6632 Suppl):98-102. doi: 10.1038/387s098
Europe PMC | doi

Johnston M, Hillier L, Riles L, Albermann K, André B, Ansorge W, Benes V, Brückner M, Delius H, Dubois E, Düsterhöft A, Entian KD, Floeth M, Goffeau A, Hebling U, Heumann K, Heuss-Neitzel D, Hilbert H, Hilger F, Kleine K, Kötter P, Louis EJ, Messenguy F, Mewes HW, Hoheisel JD. (1997)

The nucleotide sequence of Saccharomyces cerevisiae chromosome XII

Nature 387(6632 Suppl):87-90. doi: 10.1038/387s087
Europe PMC | doi

Cherest H, Davidian JC, Thomas D, Benes V, Ansorge W, Surdin-Kerjan Y. (1997)

Molecular characterization of two high affinity sulfate transporters in Saccharomyces cerevisiae

Genetics 145(3):627-635.
Europe PMC

Wiemann S, Rechmann S, Benes V, Voss H, Schwager C, Vlcek C, Stegemann J, Zimmermann J, Erfle H, Paces V, Ansorge W. (1996)

Sequencing and analysis of 51 kb on the right arm of chromosome XV from Saccharomyces cerevisiae reveals 30 open reading frames

Yeast 12(3):281-288. doi: 10.1002/(sici)1097-0061(19960315)12:3<281::aid-yea904>3.3.co;2-f
Europe PMC | doi

Wiemann S, Stegemann J, Zimmermann J, Voss H, Benes V, Ansorge W. (1996)

"Doublex" fluorescent DNA sequencing: two independent sequences obtained simultaneously in one reaction with internal labeling and unlabeled primers

Anal. Biochem. 234(2):166-174. doi: 10.1006/abio.1996.0068
Europe PMC | doi

Scholler P, Benes V, Voss H, Ansorge W, Hoheisel JD. (1996)

Sequencing 39,350 bp of Saccharomyces cerevisiae chromosome XII utilizing ordered shotgun libraries

DNA Seq. 6(5):257-262. doi: 10.3109/10425179609020872
Europe PMC | doi

Vlcek C, Benes V, Lu Z, Kutish GF, Paces V, Rock D, Letchworth GJ, Schwyzer M. (1995)

Nucleotide sequence analysis of a 30-kb region of the bovine herpesvirus 1 genome which exhibits a colinear gene arrangement with the UL21 to UL4 genes of herpes simplex virus

Virology 210(1):100-108. doi: 10.1006/viro.1995.1321
Europe PMC | doi

Mátlová R, Horská K, Benes V, Cvekl A, Sponar J. (1995)

Protein-induced bending or flexing at the 5'-end of the duck beta A-globin promoter

Gene 156(2):277-281. doi: 10.1016/0378-1119(95)00057-d
Europe PMC | doi

Benes V, Hostomský Z, Arnold L, Paces V. (1993)

M13 and pUC vectors with new unique restriction sites for cloning

Gene 130(1):151-152. doi: 10.1016/0378-1119(93)90360-f
Europe PMC | doi

Pichová I, Strop P, Sedlácek J, Kaprálek F, Benes V, Trávnícek M, Pavlícková L, Soucek M, Kostka V, Foundling S. (1992)

Isolation, biochemical characterization and crystallization of the p15gag proteinase of myeloblastosis associated virus expressed in E. coli

Int. J. Biochem. 24(2):235-242. doi: 10.1016/0020-711x(92)90252-v
Europe PMC | doi

Benes V, Arnold L, Smrt J, Paces V. (1989)

Nucleotide sequence of the right early region of Bacillus phage phi 15 and comparison with related phages: reorganization of gene 17 during evolution

Gene 75(2):341-347. doi: 10.1016/0378-1119(89)90281-3
Europe PMC | doi