Location & dates EMBL Heidelberg, Germany 14 - 20 May 2017
Deadlines Application closed

Coronavirus information for participants

The onsite course and conference programme at EMBL has been paused until the end of June 2020.


We aim to continue offering our advanced training for the scientific community however we safely can. While some events have been cancelled, many have been rescheduled for a later date and others will be delivered as virtual events.


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Course Programme

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Day 1 - Sunday 14th May 2017
TimeSpeaker
14.00 Bus to ISG
14:30-15:00

Registration

15:00-15:30

Welcome address, briefing and introductions
Kota Miura, EMBL Heidelberg, Germany

16:00-16:30 Coffee break
16:30-17:00

Poster installation

17:00 - 18.00

Keynote: Ivo Sbalzarini, Max Planck Institute of Molecular Cell Biology and Genetics, Germany
Chair: Kota Miura

18.00 - 18.30

Discussion

18.30 - 19.30

Dinner

19.30 - 22.00

Poster Session

22.00

Shuttle bus to hotel

Day 2 - Monday 15th May 2017
TimeSpeaker
8.30

Bus to EMBL ATC

9.00 - 10.00

Ana Joaquina Jimenez, Institut Curie, France
Chair: Fabrice Cordelières, University of Bordeaux, France

10.00-10.30

Discussion

10.30-12.30

M1: ImageJ Basics 1
Kota Miura, Fabrice Cordelières, Chong Zhang

12.30-13.30 Lunch
13.30-15.30

M1: ImageJ Basics 2
Kota Miura, Fabrice Cordelières, Chong Zhang,Perrine Paul-Gilloteaux

15:30-16:00

Discussion

16.00-16.30 Coffee break
16.30-17.00

Short talks

17:00-19:00

M2: ImageJ Macro Language 1
Fabrice Cordelières, Christian Tischer

19:00-20:00 Dinner
20:00-21:30 M2: ImageJ Macro Language 2
Fabrice Cordelières, Christian Tischer
21:30-22:00 Discussion
22:00 Shuttle bus to hotel
Day 3 - Tuesday 16th May 2017
TimeSpeaker
08:30

Shuttle bus to hotel

09:00-10:00

Martin Marska

10:00-10:30

Discussion

10:30-12:30

M8: Tumor Blood Vessels: 3-D Tubular Network Analysis 1
Christian Tischer, Sébastien Tosi

12:30-13:30

Lunch

13:30-15:30

M8: Tumor Blood Vessels: 3-D Tubular Network Analysis 2
Christian TischerSébastien Tosi

15:30-16:00

Discussion

16:00-16:30

Coffee break

16:30-17:00

Short talks:
2 students

17:00-19:00

M10: Colocalisation
Fabrice Cordelières, Chong Zhang, Christian Tischer

19:00-20:00

Dinner

20:00-21:30

M10: Colocalisation
Fabrice Cordelières, Chong Zhan

21:30-22:00

Discussion

22:00

Shuttle bus to hotel

Day 4 - Wednesday 17th May 2017
TimeSpeaker
08:30

Bus to the ATC

09:00-10:30

M11: Charact. of transport modes of NEMO by tracking
Jean-Yves Tinevez, Simon Flyvbjerg Norrelykke, Kota Miura

10:30-11:00

Coffee break

11:00-12:30

M12: Parhyale hawaiensis appendage growth and cell division axis
Jean-Yves Tinevez, Simon Flyvbjerg Norrelykke, Kota Miura

12:30-13:30 Lunch
13:30-15:00

Bring-Your-Problem (BYP) Session

15:00

Shuttle bus to hotel

16:00-18:30

FREE AFTERNOON
(possible practicals with instructors)

Day 5 - Thursday 18th May 2017
TimeSpeaker
08:30 Bus to the ATC
09:00-10:00

Bernd Pulverer, EMBO Journal, Germany

10:00-10:30

Discussion

10:30-12:30 M5: Introduction to Matlab 1
Giovanni Cardone, Simon Flyvbjerg Norrelykke, Perrine Paul-Gilloteaux, Sébastien Tosi
12:30-13:30

Lunch

13:30-15:30

M5: Introduction to Matlab 2
Simon Flyvbjerg Norrelykke, Perrine Paul-Gilloteaux, Sébastien Tosi, Giovanni Cardone

15:30-16:00

Discussion

16:00-16:30

Coffee break

16:30-17:00

Short talks:
2 students

17:00-18:00

M5: Introduction to Matlab 2
Simon Flyvbjerg Norrelykke, Perrine Paul-Gilloteaux, Sébastien Tosi

18:00-19:00

Dinner

19:00-20:30

M11-2 & M12-2
MSD analysis of movements and cell division axis analysis using Matlab
Simon Flyvbjerg Norrelykke, Jean-Yves Tinevez, Giovanni Cardone

20:30-21:00

Discussion

21:00

Shuttle to hotel

Day 6 - Friday 19th May 2017
TimeSpeaker
08:30

Bus to the ATC

09:00-10:00

Anna Kreshuk, Heidelberg Collaboratory for Image Processing, Germany

10:00-10:30

Discussion

10:30-12:30 M6: Quantitative Evaluation of Multi-cellular Movements in Drosophila Embryo 1
Sébastien Tosi, Szymon Stoma, Perrine Paul-Gilloteaux, Giovanni Cardone
12:30-13:30 Lunch
13:30-15:30

M6: Quantitative Evaluation of Multi-cellular Movements in Drosophila Embryo 2
Sébastien Tosi, Szymon Stoma, Perrine Paul-Gilloteaux, Giovanni Cardone

15:30-16:00

Coffee break

16:00-17:00 M13: (CLEM) - Martin Schorb, Perrine Paul-Gilloteaux
17:00-17:30

Short talks
Chair: Sébastien Tosi

17:30-18:30

M13: (CLEM) - Martin Schorb, Perrine Paul-Gilloteaux

18:30

Shuttle to ISG

19:00-24:00

Dinner

Day 7 - Saturday 20th May 2017
TimeSpeaker
10:00 Bus to the ATC
10:30-12:30

M13: (CLEM) - Perrine Paul-Gilloteaux, Martin Schorb

12:30-13:00

Discussion

13.00-13:30 Concluding remarks
13:30-14:00

Shuttle bus downtown