Location & dates EMBL Heidelberg, Germany 24 - 27 Jul 2018
Deadlines Registration closed Abstract submission closed
organiser_EMBO_Workshop_2017

EMBL Courses and Conferences during the Coronavirus pandemic

With the onsite programme paused, many of our events are now being offered in virtual formats.


Registration is open as usual for many events, with back-up plans in place to move further courses and conferences online as necessary. Registration fees for any events affected by the COVID-19 disruption are fully refundable.


More information for participants of events at EMBL Heidelberg can be found here.

Programme

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Day 1 - Tuesday 24 July 2018
TimeSpeaker
11:30 - 13:00 Arrival and Registration 
with light refreshments
13:00 - 13:15 Opening Remarks
13:15 - 18:00

Session 1: Early Development
Chair: Jérôme Wong Ng

13:15 - 13:45

Light-sheet imaging of cell division in early mouse development
Jan Ellenberg - EMBL Heidelberg, Germany

13:45 - 14:15 Cell lineage differentiation in the mouse ICM: How to make a mosaic?
Claire Chazaud - GReD, France
14:15 - 14:45 Variability and symmetry breaking in mouse preimplantation development
Dimitri Fabreges - EMBL Heidelberg, Germany
14:45 - 15:00 Preimplantation requirements for Nodal in the mouse
Jerome Collignon - Institut Jacques Monod, France
15:00 - 15:15 Studying the control of chromosome segregation in preimplantation mouse embryos by light sheet microscopy
Manuel Eguren - EMBL Heidelberg, Germany
15:15 - 16:00

Coffee Break

16:00 - 16:30

Deciphering epithelial cell movements during anterior pattering in the mouse embryo
Shankar Srinivas - University of Oxford, UK

16:30 - 17:00 Guts and gastrulation: the cellular lineages and cellular dynamics driving the morphogenesis of the endoderm in the mouse embryo
Anna‑Katerina Hadjantonakis - Memorial Sloan Kettering Cancer Center, USA
17:00 - 17:30

Regulation of cell fitness by cell competition during early mouse development
Tristan Rodriguez - Imperial College London, UK

17:30 - 17:45

Triggering of cell differentiation is driven by Notch in the mouse preimplantation embryo
Sergio Menchero - Centro Nacional de Investigaciones Cardiovasculares (CNIC), Spain

17:45 - 18:00

Significant expansion of the fluorescent reporter toolkit in mouse using a novel CRISPR-mediated genome editing method
Eszter Posfai - Hospital for Sick Children, Canada

18:00 - 19:30

Dinner in EMBL Canteen

19:30 - 21:00

Welcome Reception in Operon Foyer

Day 2 - Wednesday 25 July 2018
TimeSpeaker
09:00 - 12:00 Session 2: Post-implantation Development
Chair: Paula Gómez-Apiñániz
09:00 - 09:30

Long-lived unipotent Blimp1-positive luminal stem cells drive mammary gland organogenesis throughout adult life
Elizabeth Robertson - University of Oxford, UK

09:30 - 10:00

Imaging and biophysical manipulation of cilia involved in left-right symmetry breaking
Hiroshi Hamada - RIKEN, Japan

10:00 - 10:30

Mesoderm cells morphology, migration mode and cytoskeleton regulation differ according to their position in the mouse embryo
Isabel Migeotte - Université Libre de Bruxelles, Belgium

10:30 - 11:00

Coffee Break

11:00 - 11:30

Inferring tissue dynamics from large sets of static 3D image data: mouse limb development
James Sharpe - EMBL Barcelona, Spain

11:30 - 11:45

Ex-utero development of the mouse embryo - from fertilization to organogenesis
Rada Massarwa - Weizmann Institute of Science, Israel

11:45 - 12:00

The origin of oscillations in the mouse presomitic mesoderm
Takehito Tomita - EMBL Heidelberg, Germany

12:00 - 13:30

Lunch and Meet the Editors in Operon Foyer with:
Andrea Leibfried - Life Science Alliance, Germany 
Martina Rembold - EMBO Reports, Germany

13:30 - 14:00

Multicolor imaging of large tissues and whole embryos
Workshop presented by Susanne Holzmeister - Leica Microsystems

14:00 - 15:30

Session 2: Post-implantation Development (continued)
Chair: Marina Carpinelli

14:00 - 14:30

Facilitating the imaging of complex samples with efficient reconstruction of large datasets and intelligent microscopy
David Hörl - LMU Munich, Germany

14:30 - 15:00

Imaging and dynamic analysis of the post-implantation mouse embryo at the cellular level using light-sheet microscopy
Kate McDole - Janelia Research Campus, USA

15:00 - 15:15

Distinct region-specific cell behaviors in the visceral endoderm after anterior–posterior axis specification
Toshihiko Fujimori - National Institute for Basic Biology, Japan

15:15 - 15:30

Dullard, a phosphatase at the heart of outflow tract development and BMP pathway regulation
Jean-François Darrigrand - Sorbonne Université, France

15:30 - 16:00

Coffee Break

16:00 - 17:00

Breakout Session

Tours in various locations:
1) Advanced Light Microscopy Facility with Stefan Terjung
2) Laboratory of Robert Prevedel with Robert Prevedel
3) Laboratory of Jan Ellenberg with Isabell Schneider

Tutorial Session in Operon Large:
Image-analysis software discussion with Anna Kreshuk and Kate McDole 

17:00 - 18:30

Poster Session I (odd numbers)
with beer and snacks

18:30 - 20:00

Dinner in EMBL Canteen

20:00 - 22:00

After Dinner Drinks in Operon Foyer

Day 3 - Thursday 26 July 2018
TimeSpeaker
09:00 - 12:00

Session 3: Advanced Microscopy and Image Analysis
Chair: Judith Reichmann

09:00 - 09:30

In toto imaging and reconstruction of post-implantation mouse development at the single-cell level
Philipp Keller - Janelia Research Campus, USA

09:30 - 10:00

Advanced optical techniques for studying mouse development in-vivo
Robert Prevedel - EMBL Heidelberg, Germany

10:00 - 10:30

Adding dimensions to intravital imaging
Scott Fraser - California Institute of Technology, USA

10:30 - 11:00

Coffee Break and Meet the Editors with:
Andrea Leibfried - Life Science Alliance, Germany 
Martina Rembold - EMBO Reports, Germany

11:00 - 11:30

Live analysis of heart tube formation in the mouse embryo
Miguel Torres - Spanish National Centre for Cardiovascular Research (CNIC), Spain

11:30 - 11:45

High fidelity lineage tracing in mouse pre-implantation embryos using primed conversion of photoconvertible proteins
Maaike Welling - ETH Zurich, Switzerland

11:45 - 13:30 Lunch in Operon Foyer
13:30 - 17:00 Session 4: Quantitative Biology, Modeling and Experimental Manipulation
Chair: André Dias
13:30 - 14:00

Phase separation and flow of tight junction components are required for tight junction formation and maturation
Carl-Philipp Heisenberg - Institute of Science and Technology, Austria

14:00 - 14:30

Optogenetics for intracellular codebreaking: How ERK activity is interpreted to control gene expression and cell fate
Jared Toettcher - Princeton University, USA

14:30 - 15:00

Towards in vitro modeling of heart development
Giuliana Rossi - École Polytechnique Fédérale de Lausanne (EPFL), Switzerland

15:00 - 15:30

Coffee Break

15:30 - 16:00

Principle, promise and limitations of deep neural networks for segmentation and tracking
Fred Hamprecht - University of Heidelberg, Germany

16:00 - 16:30

Imaging as a tool to understand the roles of essential mammalian genes
Mary Dickinson - Baylor College of Medicine, USA

16:30 - 16:45

Using kinase translocation reporters to monitor single cell MAP kinase activity during mouse preimplantation development
Sergi Regot - Johns Hopkins University, USA

16:45 - 17:00

Elucidating the role of mechanical cues during peri-implantation mouse development
Stefano Vianello - École Polytechnique Fédérale de Lausanne (EPFL), Switzerland

17:00 - 18:30

Poster Session II (even numbers)
with beer and snacks

18:30 - 20:30

Conference Dinner in EMBL Canteen

20:30 - 23:00

Conference Party in Operon Foyer

Day 4 - Friday 27 July 2018
TimeSpeaker
09:00 - 12:30 Session 5: Organogenesis
Chair: Matthew Anderson
09:00 - 09:30

Gastruloids: an ESC based model for mammalian gastrulation and axial organization
Alfonso Martinez Arias - University of Cambridge, UK

09:30 - 10:00

The role of signaling oscillations during mouse embryo mesoderm pattering
Alexander Aulehla - EMBL Heidelberg, Germany

10:00 - 10:30

Mechanism of synchronized Hes7 oscillations in the somite segmentation clock
Ryoichiro Kageyama - Kyoto University, Japan

10:30 - 11:00

Coffee Break

11:00 - 11:30

Neural tube closure: gene-environment interactions
Lee Niswander - University of Colorado Denver, USA

11:30 - 12:00

Mouse heart looping in 3 dimensions
Sigolène Meilhac - Institut Pasteur and Institut Imagine, France

12:00 - 12:15

Vertical cell migration invaginates ectodermal organs
Jeremy Green - King's College London, UK

12:15 - 12:30

In vivo multiphoton imaging of the cerebrovasculature during early post-natal development
Vanessa Coelho-Santos - University of Coimbra, Portugal

12:30 - 13:00

Poster Prize and Summary Discussion

13:00 

Packed Lunch and Departure