Location & dates EMBL Heidelberg, Germany 24 - 27 Jul 2018
Deadlines Registration closed Abstract submission closed
organiser_EMBO_Workshop_2017

Programme

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Day 1 - Tuesday 24 July 2018
TimeSpeaker
11:30 - 13:00 Arrival and Registration 
with light refreshments
13:00 - 13:15 Opening Remarks
13:15 - 18:00

Session 1: Early Development
Chair: Jérôme Wong Ng

13:15 - 13:45

Light-sheet imaging of cell division in early mouse development
Jan Ellenberg - EMBL Heidelberg, Germany

13:45 - 14:15 Cell lineage differentiation in the mouse ICM: How to make a mosaic?
Claire Chazaud - GReD, France
14:15 - 14:45 Variability and symmetry breaking in mouse preimplantation development
Dimitri Fabreges - EMBL Heidelberg, Germany
14:45 - 15:00 Preimplantation requirements for Nodal in the mouse
Jerome Collignon - Institut Jacques Monod, France
15:00 - 15:15 Studying the control of chromosome segregation in preimplantation mouse embryos by light sheet microscopy
Manuel Eguren - EMBL Heidelberg, Germany
15:15 - 16:00

Coffee Break

16:00 - 16:30

Deciphering epithelial cell movements during anterior pattering in the mouse embryo
Shankar Srinivas - University of Oxford, UK

16:30 - 17:00 Guts and gastrulation: the cellular lineages and cellular dynamics driving the morphogenesis of the endoderm in the mouse embryo
Anna‑Katerina Hadjantonakis - Memorial Sloan Kettering Cancer Center, USA
17:00 - 17:30

Regulation of cell fitness by cell competition during early mouse development
Tristan Rodriguez - Imperial College London, UK

17:30 - 17:45

Triggering of cell differentiation is driven by Notch in the mouse preimplantation embryo
Sergio Menchero - Centro Nacional de Investigaciones Cardiovasculares (CNIC), Spain

17:45 - 18:00

Significant expansion of the fluorescent reporter toolkit in mouse using a novel CRISPR-mediated genome editing method
Eszter Posfai - Hospital for Sick Children, Canada

18:00 - 19:30

Dinner in EMBL Canteen

19:30 - 21:00

Welcome Reception in Operon Foyer

Day 2 - Wednesday 25 July 2018
TimeSpeaker
09:00 - 12:00 Session 2: Post-implantation Development
Chair: Paula Gómez-Apiñániz
09:00 - 09:30

Long-lived unipotent Blimp1-positive luminal stem cells drive mammary gland organogenesis throughout adult life
Elizabeth Robertson - University of Oxford, UK

09:30 - 10:00

Imaging and biophysical manipulation of cilia involved in left-right symmetry breaking
Hiroshi Hamada - RIKEN, Japan

10:00 - 10:30

Mesoderm cells morphology, migration mode and cytoskeleton regulation differ according to their position in the mouse embryo
Isabel Migeotte - Université Libre de Bruxelles, Belgium

10:30 - 11:00

Coffee Break

11:00 - 11:30

Inferring tissue dynamics from large sets of static 3D image data: mouse limb development
James Sharpe - EMBL Barcelona, Spain

11:30 - 11:45

Ex-utero development of the mouse embryo - from fertilization to organogenesis
Rada Massarwa - Weizmann Institute of Science, Israel

11:45 - 12:00

The origin of oscillations in the mouse presomitic mesoderm
Takehito Tomita - EMBL Heidelberg, Germany

12:00 - 13:30

Lunch and Meet the Editors in Operon Foyer with:
Andrea Leibfried - Life Science Alliance, Germany 
Martina Rembold - EMBO Reports, Germany

13:30 - 14:00

Multicolor imaging of large tissues and whole embryos
Workshop presented by Susanne Holzmeister - Leica Microsystems

14:00 - 15:30

Session 2: Post-implantation Development (continued)
Chair: Marina Carpinelli

14:00 - 14:30

Facilitating the imaging of complex samples with efficient reconstruction of large datasets and intelligent microscopy
David Hörl - LMU Munich, Germany

14:30 - 15:00

Imaging and dynamic analysis of the post-implantation mouse embryo at the cellular level using light-sheet microscopy
Kate McDole - Janelia Research Campus, USA

15:00 - 15:15

Distinct region-specific cell behaviors in the visceral endoderm after anterior–posterior axis specification
Toshihiko Fujimori - National Institute for Basic Biology, Japan

15:15 - 15:30

Dullard, a phosphatase at the heart of outflow tract development and BMP pathway regulation
Jean-François Darrigrand - Sorbonne Université, France

15:30 - 16:00

Coffee Break

16:00 - 17:00

Breakout Session

Tours in various locations:
1) Advanced Light Microscopy Facility with Stefan Terjung
2) Laboratory of Robert Prevedel with Robert Prevedel
3) Laboratory of Jan Ellenberg with Isabell Schneider

Tutorial Session in Operon Large:
Image-analysis software discussion with Anna Kreshuk and Kate McDole 

17:00 - 18:30

Poster Session I (odd numbers)
with beer and snacks

18:30 - 20:00

Dinner in EMBL Canteen

20:00 - 22:00

After Dinner Drinks in Operon Foyer

Day 3 - Thursday 26 July 2018
TimeSpeaker
09:00 - 12:00

Session 3: Advanced Microscopy and Image Analysis
Chair: Judith Reichmann

09:00 - 09:30

In toto imaging and reconstruction of post-implantation mouse development at the single-cell level
Philipp Keller - Janelia Research Campus, USA

09:30 - 10:00

Advanced optical techniques for studying mouse development in-vivo
Robert Prevedel - EMBL Heidelberg, Germany

10:00 - 10:30

Adding dimensions to intravital imaging
Scott Fraser - California Institute of Technology, USA

10:30 - 11:00

Coffee Break and Meet the Editors with:
Andrea Leibfried - Life Science Alliance, Germany 
Martina Rembold - EMBO Reports, Germany

11:00 - 11:30

Live analysis of heart tube formation in the mouse embryo
Miguel Torres - Spanish National Centre for Cardiovascular Research (CNIC), Spain

11:30 - 11:45

High fidelity lineage tracing in mouse pre-implantation embryos using primed conversion of photoconvertible proteins
Maaike Welling - ETH Zurich, Switzerland

11:45 - 13:30 Lunch in Operon Foyer
13:30 - 17:00 Session 4: Quantitative Biology, Modeling and Experimental Manipulation
Chair: André Dias
13:30 - 14:00

Phase separation and flow of tight junction components are required for tight junction formation and maturation
Carl-Philipp Heisenberg - Institute of Science and Technology, Austria

14:00 - 14:30

Optogenetics for intracellular codebreaking: How ERK activity is interpreted to control gene expression and cell fate
Jared Toettcher - Princeton University, USA

14:30 - 15:00

Towards in vitro modeling of heart development
Giuliana Rossi - École Polytechnique Fédérale de Lausanne (EPFL), Switzerland

15:00 - 15:30

Coffee Break

15:30 - 16:00

Principle, promise and limitations of deep neural networks for segmentation and tracking
Fred Hamprecht - University of Heidelberg, Germany

16:00 - 16:30

Imaging as a tool to understand the roles of essential mammalian genes
Mary Dickinson - Baylor College of Medicine, USA

16:30 - 16:45

Using kinase translocation reporters to monitor single cell MAP kinase activity during mouse preimplantation development
Sergi Regot - Johns Hopkins University, USA

16:45 - 17:00

Elucidating the role of mechanical cues during peri-implantation mouse development
Stefano Vianello - École Polytechnique Fédérale de Lausanne (EPFL), Switzerland

17:00 - 18:30

Poster Session II (even numbers)
with beer and snacks

18:30 - 20:30

Conference Dinner in EMBL Canteen

20:30 - 23:00

Conference Party in Operon Foyer

Day 4 - Friday 27 July 2018
TimeSpeaker
09:00 - 12:30 Session 5: Organogenesis
Chair: Matthew Anderson
09:00 - 09:30

Gastruloids: an ESC based model for mammalian gastrulation and axial organization
Alfonso Martinez Arias - University of Cambridge, UK

09:30 - 10:00

The role of signaling oscillations during mouse embryo mesoderm pattering
Alexander Aulehla - EMBL Heidelberg, Germany

10:00 - 10:30

Mechanism of synchronized Hes7 oscillations in the somite segmentation clock
Ryoichiro Kageyama - Kyoto University, Japan

10:30 - 11:00

Coffee Break

11:00 - 11:30

Neural tube closure: gene-environment interactions
Lee Niswander - University of Colorado Denver, USA

11:30 - 12:00

Mouse heart looping in 3 dimensions
Sigolène Meilhac - Institut Pasteur and Institut Imagine, France

12:00 - 12:15

Vertical cell migration invaginates ectodermal organs
Jeremy Green - King's College London, UK

12:15 - 12:30

In vivo multiphoton imaging of the cerebrovasculature during early post-natal development
Vanessa Coelho-Santos - University of Coimbra, Portugal

12:30 - 13:00

Poster Prize and Summary Discussion

13:00 

Packed Lunch and Departure