
EMBL Courses and Conferences during the Coronavirus pandemic
With the onsite programme paused, many of our events are now being offered in virtual formats.
Registration is open as usual for many events, with back-up plans in place to move further courses and conferences online as necessary. Registration fees for any events affected by the COVID-19 disruption are fully refundable.
More information for participants of events at EMBL Heidelberg can be found here.
Programme
Got something to say? Tweet it with #EMBLnanopore
Time | Speaker | Location |
---|---|---|
09:00 |
Self-introduction, project presentation |
Flex Lab A+B |
Introduction to Nanopore Sequencing |
Flex Lab A+B | |
Coffee break |
Flex Lab A+B |
|
Sample and library prep theory |
Flex Lab A+B | |
Introduction to phylogenetics/species identification |
Flex Lab A+B | |
Lunch |
EMBL Canteen | |
Afternoon |
QC DNA samples |
Training Lab B |
Set up 16S PCR |
Training Lab B |
|
Introduction to MinKNOW and QC flow cells |
Training Lab B |
|
Coffee Break |
Flex Lab A+B |
|
Optional: Q&A session on command line and Linux |
Computer Training Lab |
|
18.00 |
Guided tour |
|
19.00 |
Course Dinner Downtown at Restaurant Goldener Falke |
Time | Speaker | Location |
---|---|---|
09:00 |
Flow-cell priming and library loading |
Flex Lab A+B |
Library prep for 16S |
Training Lab B |
|
Library prep for 1D |
Training Lab B |
|
Coffee Break |
Computer Training Lab |
|
Flow-cell loading practice and library loading |
Training Lab B |
|
Lunch |
EMBL Canteen |
|
Afternoon |
Assessing a GridION/MinION run |
Training Lab B |
Introduction to Dogfish/basecalling |
||
Introduction to Epi2ME/16S workflow/WIMP |
Computer Training Lab | |
Coffee break |
Computer Training Lab |
|
Set up 16S/WIMP workflows |
Computer Training Lab |
|
Optional: Q&A session on command line and Linux |
Computer Training Lab |
|
Dinner |
EMBL Canteen |
Time | Speaker | Location |
---|---|---|
09:00 |
Library prep for rapid barcoding E.Coli |
Training Lab B |
Flow-cell loading practice and library loading |
Training Lab B |
|
Coffee Break |
Computer Training Lab |
|
Assessing a GridION/MinION run |
Training Lab B | |
Lunch |
EMBL Canteen |
|
Afternoon |
Data Analysis |
Computer Training Lab |
Using the Oxford Nanopore technology for de-novo plant genome sequencing |
Computer Training Lab |
|
Coffee Break |
Computer Training Lab | |
Run through an example data set |
Computer Training Lab |
|
Dinner |
EMBL Canteen |
Time | Speaker | Location |
---|---|---|
09:00 |
Review runs |
Training Lab B |
Review 16S/WIMP workflows |
Computer Training Lab |
|
Coffee Break |
Computer Training Lab |
|
Data Analysis (follow data analysis script on chosen datasets) |
Computer Training Lab |
|
Lunch |
EMBL Canteen | |
Afternoon |
Data Analysis continued |
|
Group presentation with data analysis results |
Flex Lab A+B | |
15:15 |
End of the course and bus departure |